Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pisl_0884 |
Symbol | |
ID | 4617522 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum islandicum DSM 4184 |
Kingdom | Archaea |
Replicon accession | NC_008701 |
Strand | - |
Start bp | 790306 |
End bp | 792678 |
Gene Length | 2373 bp |
Protein Length | 790 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 639783980 |
Product | SMC domain-containing protein |
Protein accession | YP_930403 |
Protein GI | 119872396 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0419] ATPase involved in DNA repair |
TIGRFAM ID | [TIGR03185] DNA sulfur modification protein DndD |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.922995 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 44 |
Fosmid unclonability p-value | 0.368139 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTGGAGGA TAGAAAAGAT TGAACTAGAA AATTTCAGGT CATACAAGGG GAGACATGAG GTAAGCCTAG GGGATGTTAC AATTTTATTG GGAAGAATCG GGGCTGGGAA GACCTCTCTC CTATATGCCA TAGAATATGC CCTCTTTGGA AAACAGCTTG AGGTAAGAGA GAGAGTAGCA AAACTTGTAG ATCTGATTAA TGTAGACGCT CAGGAAGCCA ATGTAGCGCT AGAATTACGC AGAGGCAACG ACAAACTTCG TATAGAAAGA AGACTAGGGC GGCGGGGATC TGAGAAGCTT GTTGTACTTT ATAACGGCAT TAAACTAAGA GATAGAGATG CTGAAGAAAG ACTAGTTGAA CTCATAGGAG CCGACGAAGA CATATATGAA CGACTTGTAT ATATTTCGCA TAGGACTCTA GAGGGTTTTA TATACGGCAC AGCACAAAAG AGAACGCTTT CAGTAGACCG TCTATTTGGT ATTGACATAA TTGACAACAT TTTAAGAGTT GTGTCATCTA TAGAGAAATA TCTGTTGGAG AAAGCCGAAA ATTTGAGAAA AAGACTTTCT ACATATGAAA AATATAGAGA TATAATTAAG AAATATGGTG GCTATAAAGG CGTTGTAACT AGGTTAGAGA CTATAGAAGG TGAGCTGGCG GCGTTAAAAG AGCGCGAGGT AAATCTTACT AAAACAGTAG AAGAGTTAGC CAAGAGAAGA GCCGGCTATT TGGAGAAAAT CAGAGAGAAC GAGAACATTT TATTGGAGTA TTACAAAACG AGATCTGAAT TAGAGATCTT GGAATCAACT ACAGGCGAAG ATGTTGGTTT AGACGCCGTT GAGAAAATTA GAGACGCTCT GCAAGAGGCC TTAGAGGAGT ATGAACATAT ACTGGGGCAT GAGCTTCTTG AAAAACTCAC AACTAGAGAC CTAGAATCTT TATCGGCTGC CATGGTTGAA GCTTATGAGG CCCTTGTTAG ATTATCAAAA GATTTAGAGA GTCAGATTTC TGAAGTACGA AAGACATACG AACAGTATCT AGCTAGGGTG AAGAAGCTTG AAGACGAAAT TAAAGAAGTT GAGACTAAAC TGAGGAGACT TGAAAGGTCA TATATACGGT TTAAAGAGCT TCAGAAGTCG TTTCAATCTC TAGAAACGGC TAAAGCTGCC CTCAACGAGT TGAAGAGGAG GCTCGAAGAA ACTGAGAAAT CTATGGCATA TATTTCGGCT CTTAAGACGG TATCTCTCTA TATTGCGGAA ATAGGCGTCA ATAGATGTCC TATATGCGGC TCTCCCATAA GTCGGGAGGT TGCGTTAAAC ATAGCTAGAG AGGTAGAGAG CAAATTTGGC GAGTTAATAC ACGAAGTAGA AAATCTAAAG GAGAGGATTA GAGAGTATGA AAAAGCTGTA GACGAAATGG AAATATTAAG CGGCGAGGTT GCAGAGTATT TATCCACAAA GAATAGACTA GAGGAGTTAA AACTTGAGAG AGAAGAAATC ATTAAGAAAA TGATACAGGC TGAAAAAGCA CTTAAACAAC TAGAGAGACG TGTTGAAAAA TTACACTCTT TGATAACTAG GGTTGACAAA CGCACGATTT TAGATGCGCT TTCTAAATAT GGAAAGATGC TTAGAGTTCG AGAGCTAAAA CGCCGCCTTA AAGAGCTTGA GGAAATGTTA AACAAAGCCG GCGTCGTTAG AGAAATCTTA GATGTGGAAA TGCGCTGGAG GGAGATTACC GAAGAGCTAG AGAGAACTTC TAGCCGTTTA GCAGAATTAT ACAGAGAGAA GGCTGTATTA GAAGAGATTG TAAGAGAAGT GGGGGGAGAT GCGGAAAATT TGAAAAAGGC ACTAGATAAC ACGCTTTATG CCTATAGCAA GCTACAAGAA GTTAAGGCAA AGTTTGAACT TGTCAAAGTC AACGCGAGAG CTCGGTTAGT GGAGATTGCA AAATCTCGCT TTAACGAAGT ATTTCTAACG CTCTATAGAT ATGGCGATAT TTCAAAAGTA AATGTAGATC TAGAACAACG TAAGGGCTAC TACGACTTCT ATGCGATATC TCCCACTGGC GAGAGATACG GTATTTCAAA GCTAAGCGAT GGACAAAGAC TTTCGATAGC TCTAGCCCTA GCTCTCGCGC TTAGGGAAAT ATCCAATATA CAAATTGGCT TTATAATATT TGACGAACCT ATTCCATATG TTGATGTAAA TATCAGGAGA GCTTTCGCAG AATTAGTTAG ATCTCTTTCT TCACGTTATC AGATCGTAGT AGCTACACAG TCTGGCGATT TTGCAGATGT GATAAAAGAC GCGGTTCCAA ACGCAAGACT ATATATGGTG ACTAAGGAGG AAAGTTCTAG AGTTGCAGAG TAA
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Protein sequence | MWRIEKIELE NFRSYKGRHE VSLGDVTILL GRIGAGKTSL LYAIEYALFG KQLEVRERVA KLVDLINVDA QEANVALELR RGNDKLRIER RLGRRGSEKL VVLYNGIKLR DRDAEERLVE LIGADEDIYE RLVYISHRTL EGFIYGTAQK RTLSVDRLFG IDIIDNILRV VSSIEKYLLE KAENLRKRLS TYEKYRDIIK KYGGYKGVVT RLETIEGELA ALKEREVNLT KTVEELAKRR AGYLEKIREN ENILLEYYKT RSELEILEST TGEDVGLDAV EKIRDALQEA LEEYEHILGH ELLEKLTTRD LESLSAAMVE AYEALVRLSK DLESQISEVR KTYEQYLARV KKLEDEIKEV ETKLRRLERS YIRFKELQKS FQSLETAKAA LNELKRRLEE TEKSMAYISA LKTVSLYIAE IGVNRCPICG SPISREVALN IAREVESKFG ELIHEVENLK ERIREYEKAV DEMEILSGEV AEYLSTKNRL EELKLEREEI IKKMIQAEKA LKQLERRVEK LHSLITRVDK RTILDALSKY GKMLRVRELK RRLKELEEML NKAGVVREIL DVEMRWREIT EELERTSSRL AELYREKAVL EEIVREVGGD AENLKKALDN TLYAYSKLQE VKAKFELVKV NARARLVEIA KSRFNEVFLT LYRYGDISKV NVDLEQRKGY YDFYAISPTG ERYGISKLSD GQRLSIALAL ALALREISNI QIGFIIFDEP IPYVDVNIRR AFAELVRSLS SRYQIVVATQ SGDFADVIKD AVPNARLYMV TKEESSRVAE
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