Gene Pisl_0845 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_0845 
Symbol 
ID4618019 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp755393 
End bp756979 
Gene Length1587 bp 
Protein Length528 aa 
Translation table11 
GC content42% 
IMG OID639783941 
ProductDNA topoisomerase VI subunit B 
Protein accessionYP_930364 
Protein GI119872357 
COG category[L] Replication, recombination and repair 
COG ID[COG1389] DNA topoisomerase VI, subunit B 
TIGRFAM ID[TIGR01052] DNA topoisomerase VI, B subunit 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.534974 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value0.175394 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCTTCAA TATATTCTTA TGAAGCTTTG CCGGTAGCCG AATGGTTTAG ACGCAATAGA 
GAGTTAGCGG GATTCCACAA TCCAGCAAGG GCACTTTATC AAACTATTAG AGAACTTGTT
GAAAACTCTC TAGACGCCAC GGAGACCTAC GGCATTTTAC CTAACATATA CATCCGGGTT
AGCATAGAAG ATGAGCAAAA GGGGTGGGCG TCGGTATATG TAGAAGACAA CGGAATAGGT
ATTCCAGGCA ACGAAATTCC GAATGTCTTT GGCCGCGTCT TTTATAGCAG TAAATACAAG
ATAAAACAAC ATCGCGGCGT ATTTGGCCTA GGCCTTAAGA TGGTGGTGTT ATATTCACAA
AGTACTACAA ATAAACCTGT ATATGTCAGA TCTTCAACTA TTAAATCAGA TAAAATATAT
GAATACCAAA TAATGATCGA TACAAATAAT AACAGTCCAA TTATTTTAGA TAGACGAGAG
TACCCTAATA AATACAAATG GCACGGCACA GCTGTCAAAG TATATTTAGA GGGCAACTGG
CCTGCTGCAA AAAAGAGAAT CGAAGACTAT TTAAAGAGAA CTGCCATCAT AGCGCCGTAT
GCCGAAATTA TACTCAAGAG TCCCGATTTA GAGTTGTGGT TAAAGAGGAG AACCACGAAA
TTACCACCAC CGCCTAAGGA AGGATTGCCG CATCCAAAAA GCGTAGACGT AGACACTGTA
AAACAAATGC TGTTAGAAAG TAGGAACATG AGTCTCTTGG AGTTTCTAAC GGAAAATTTT
GATGCAGTTG GCGAGGGCAC AGCCAAGGCT TTTCTTGAGT GGGCAGGTTT CAACCCAAAT
ACGAAGACTA CGGCGCTAAC TCCTGAGGAA ATCGTAAGAC TGGTTGAAAA AATGAAACAA
TACGAAGGTT GGCGAAGGCC TCGTGCTGAC TGGCTCTCTC CGGTCGGCTC GGAACTCTTA
GAAATAGGCG CGAAGGCTAT TTTGGGCGCT GAGGCTGTCT TCGCGGTTAC GCGTAAGCCA
GAATCCTACA GCGGCCACCC CTTTATAGTT GAAGTGGCTG TGGCGTGGGG CGGCCAGATA
CCGCCGGTTG ACAAACCCCT CTTGTTACGT TATGCTAATA AAATCCCCCT ACTATACGAC
GAAGGTGCTG ATGTTGCTAG AAAAATAGTT GATGAGTTTA ACTGGCAGAA CTACAAGATA
AAATTCCCAG CCCCCCTTGC TGTAATTACT CATATATGTT CAACCAAGAT ACCATATGCA
TCAGCAGGTA AAGAGGCCAT TGCGGAAGTA CCAGAAATAG AAAAGGAGAT AAGACTTGCG
CTTAGAGATG TAGCAAAGAA GTTGAGACTA TACTTATCAC GGAAGGAGAA GGAAATGGAA
CTATTGAATA AATACATATC TCTAGCTAAA TATGTGGATG AGATAGCACA TAATCTATCG
ATAATTACAA GGTTAGATAG GGAACCACTA GAGAAAAACC TCTATAAATT AATTGAGAAG
AAAATCGGCT TAACAATAGA TGAGCTAATT AAACATACAT TATCGACTCA ATTAACACAA
CAAGAAGAGA CTATAGCTGC TGCTTGA
 
Protein sequence
MSSIYSYEAL PVAEWFRRNR ELAGFHNPAR ALYQTIRELV ENSLDATETY GILPNIYIRV 
SIEDEQKGWA SVYVEDNGIG IPGNEIPNVF GRVFYSSKYK IKQHRGVFGL GLKMVVLYSQ
STTNKPVYVR SSTIKSDKIY EYQIMIDTNN NSPIILDRRE YPNKYKWHGT AVKVYLEGNW
PAAKKRIEDY LKRTAIIAPY AEIILKSPDL ELWLKRRTTK LPPPPKEGLP HPKSVDVDTV
KQMLLESRNM SLLEFLTENF DAVGEGTAKA FLEWAGFNPN TKTTALTPEE IVRLVEKMKQ
YEGWRRPRAD WLSPVGSELL EIGAKAILGA EAVFAVTRKP ESYSGHPFIV EVAVAWGGQI
PPVDKPLLLR YANKIPLLYD EGADVARKIV DEFNWQNYKI KFPAPLAVIT HICSTKIPYA
SAGKEAIAEV PEIEKEIRLA LRDVAKKLRL YLSRKEKEME LLNKYISLAK YVDEIAHNLS
IITRLDREPL EKNLYKLIEK KIGLTIDELI KHTLSTQLTQ QEETIAAA