Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pisl_0845 |
Symbol | |
ID | 4618019 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum islandicum DSM 4184 |
Kingdom | Archaea |
Replicon accession | NC_008701 |
Strand | + |
Start bp | 755393 |
End bp | 756979 |
Gene Length | 1587 bp |
Protein Length | 528 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 639783941 |
Product | DNA topoisomerase VI subunit B |
Protein accession | YP_930364 |
Protein GI | 119872357 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1389] DNA topoisomerase VI, subunit B |
TIGRFAM ID | [TIGR01052] DNA topoisomerase VI, B subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.534974 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 0.175394 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTCTTCAA TATATTCTTA TGAAGCTTTG CCGGTAGCCG AATGGTTTAG ACGCAATAGA GAGTTAGCGG GATTCCACAA TCCAGCAAGG GCACTTTATC AAACTATTAG AGAACTTGTT GAAAACTCTC TAGACGCCAC GGAGACCTAC GGCATTTTAC CTAACATATA CATCCGGGTT AGCATAGAAG ATGAGCAAAA GGGGTGGGCG TCGGTATATG TAGAAGACAA CGGAATAGGT ATTCCAGGCA ACGAAATTCC GAATGTCTTT GGCCGCGTCT TTTATAGCAG TAAATACAAG ATAAAACAAC ATCGCGGCGT ATTTGGCCTA GGCCTTAAGA TGGTGGTGTT ATATTCACAA AGTACTACAA ATAAACCTGT ATATGTCAGA TCTTCAACTA TTAAATCAGA TAAAATATAT GAATACCAAA TAATGATCGA TACAAATAAT AACAGTCCAA TTATTTTAGA TAGACGAGAG TACCCTAATA AATACAAATG GCACGGCACA GCTGTCAAAG TATATTTAGA GGGCAACTGG CCTGCTGCAA AAAAGAGAAT CGAAGACTAT TTAAAGAGAA CTGCCATCAT AGCGCCGTAT GCCGAAATTA TACTCAAGAG TCCCGATTTA GAGTTGTGGT TAAAGAGGAG AACCACGAAA TTACCACCAC CGCCTAAGGA AGGATTGCCG CATCCAAAAA GCGTAGACGT AGACACTGTA AAACAAATGC TGTTAGAAAG TAGGAACATG AGTCTCTTGG AGTTTCTAAC GGAAAATTTT GATGCAGTTG GCGAGGGCAC AGCCAAGGCT TTTCTTGAGT GGGCAGGTTT CAACCCAAAT ACGAAGACTA CGGCGCTAAC TCCTGAGGAA ATCGTAAGAC TGGTTGAAAA AATGAAACAA TACGAAGGTT GGCGAAGGCC TCGTGCTGAC TGGCTCTCTC CGGTCGGCTC GGAACTCTTA GAAATAGGCG CGAAGGCTAT TTTGGGCGCT GAGGCTGTCT TCGCGGTTAC GCGTAAGCCA GAATCCTACA GCGGCCACCC CTTTATAGTT GAAGTGGCTG TGGCGTGGGG CGGCCAGATA CCGCCGGTTG ACAAACCCCT CTTGTTACGT TATGCTAATA AAATCCCCCT ACTATACGAC GAAGGTGCTG ATGTTGCTAG AAAAATAGTT GATGAGTTTA ACTGGCAGAA CTACAAGATA AAATTCCCAG CCCCCCTTGC TGTAATTACT CATATATGTT CAACCAAGAT ACCATATGCA TCAGCAGGTA AAGAGGCCAT TGCGGAAGTA CCAGAAATAG AAAAGGAGAT AAGACTTGCG CTTAGAGATG TAGCAAAGAA GTTGAGACTA TACTTATCAC GGAAGGAGAA GGAAATGGAA CTATTGAATA AATACATATC TCTAGCTAAA TATGTGGATG AGATAGCACA TAATCTATCG ATAATTACAA GGTTAGATAG GGAACCACTA GAGAAAAACC TCTATAAATT AATTGAGAAG AAAATCGGCT TAACAATAGA TGAGCTAATT AAACATACAT TATCGACTCA ATTAACACAA CAAGAAGAGA CTATAGCTGC TGCTTGA
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Protein sequence | MSSIYSYEAL PVAEWFRRNR ELAGFHNPAR ALYQTIRELV ENSLDATETY GILPNIYIRV SIEDEQKGWA SVYVEDNGIG IPGNEIPNVF GRVFYSSKYK IKQHRGVFGL GLKMVVLYSQ STTNKPVYVR SSTIKSDKIY EYQIMIDTNN NSPIILDRRE YPNKYKWHGT AVKVYLEGNW PAAKKRIEDY LKRTAIIAPY AEIILKSPDL ELWLKRRTTK LPPPPKEGLP HPKSVDVDTV KQMLLESRNM SLLEFLTENF DAVGEGTAKA FLEWAGFNPN TKTTALTPEE IVRLVEKMKQ YEGWRRPRAD WLSPVGSELL EIGAKAILGA EAVFAVTRKP ESYSGHPFIV EVAVAWGGQI PPVDKPLLLR YANKIPLLYD EGADVARKIV DEFNWQNYKI KFPAPLAVIT HICSTKIPYA SAGKEAIAEV PEIEKEIRLA LRDVAKKLRL YLSRKEKEME LLNKYISLAK YVDEIAHNLS IITRLDREPL EKNLYKLIEK KIGLTIDELI KHTLSTQLTQ QEETIAAA
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