Gene Pisl_0839 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_0839 
Symbol 
ID4618070 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp751734 
End bp752606 
Gene Length873 bp 
Protein Length290 aa 
Translation table11 
GC content40% 
IMG OID639783935 
Producthypothetical protein 
Protein accessionYP_930358 
Protein GI119872351 
COG category[S] Function unknown 
COG ID[COG1992] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.660796 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value0.142658 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATACCTG TCGAATTCGT AGTCGAGGTC TTCATAGCGC CTTTAAAAGG CTTGTTGGCA 
CACGAACTAG CCGAAATGGG ATATTCACAA AGCAAAATAG GGCAACTCTT AGGTATTTCG
CAACCTGCTG TCAGTGCATA TCTCAAAAAC CCGAAGACAT ATTACGAAGA AAAACTTCTT
AAGATAATAG ACAGGAGAGA ACTGGGGAGA TTGATAAGAT CCACAAAGAG TTTGGTTGAG
TTGGGAAGTG TGGAAGAAGC ACTACGTTAT CTCAACAACT ATGCGTTAAC TCTACTTTCA
ACACTTAGAT TATGTCGATT ACATAGAGTA ATGCACCCAA TGTTACAAAG CTGTGAGATT
TGTAAAGATA TCCATATATA CACTGAGGTT GTAAAAAGAG TAGAAACTGC TTTCGAGATT
TTGCGTAGGT GTAATAACTG CTACAAGTTG GTGCCAAAGG TTTTAATGAA TATAATAGAA
CTAGACCTAG GAGTCGGAGT TGGATTTCCA GGTAGAATAT ATGTAGAAGG AACTCAACTA
ATGGTGAGGG GGAAGCCTAA GCCGGGTGCT TCACGATTTT TGACAGCTCT ATTACAAGAG
GTGAATAAAA TACACGGCGA GATCAAGGCG GTTGCAAATA TCGCATACGT GGCTAAGGAA
TGTATTAAAA ATAAACTAAA TGTAGCAGAG GTAGGGCCTA GCAATAGCGA GGAGGAGATA
ATATCTAACG TTGTTTCAGT ATTTCGTAGA GAAGTATTCG ACGTCATTTA TGATTCAGGA
GGTCGTGGGA TAGAGCCAAA CGCTTACGTT TTTGGCATAG ACGCCATAGA TGTTGCCACA
AAGATCGTGG AAATAGCCAA TTGCATCTCG TAA
 
Protein sequence
MIPVEFVVEV FIAPLKGLLA HELAEMGYSQ SKIGQLLGIS QPAVSAYLKN PKTYYEEKLL 
KIIDRRELGR LIRSTKSLVE LGSVEEALRY LNNYALTLLS TLRLCRLHRV MHPMLQSCEI
CKDIHIYTEV VKRVETAFEI LRRCNNCYKL VPKVLMNIIE LDLGVGVGFP GRIYVEGTQL
MVRGKPKPGA SRFLTALLQE VNKIHGEIKA VANIAYVAKE CIKNKLNVAE VGPSNSEEEI
ISNVVSVFRR EVFDVIYDSG GRGIEPNAYV FGIDAIDVAT KIVEIANCIS