Gene Pisl_0771 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_0771 
Symbol 
ID4618043 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp700107 
End bp700775 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content41% 
IMG OID639783865 
Product30S ribosomal protein S3Ae 
Protein accessionYP_930290 
Protein GI119872283 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1890] Ribosomal protein S3AE 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.97943 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value0.00503486 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCTGAGA AGCAGAAAGC TGTAGCCGCA CAGGAGAGAG TTACAATTTC TAAACGAGAT 
CCTTGGGCAT TAAAGAAATG GTTCAGCGTA TATGCGCCTT CGTATCTTGG TGGAGTATTT
TTAGCAGAAG TACCAGCCTC AGAACCTCAG AAGCTGTTGT TAAGAACTCT TGAAGTTTCG
CTTTTTGACA TCACCAAGGA CTTGTCGCAT CTACCTATTA AATTGAGGTT TCAGATACAT
AAAGTCGATG GCTTAAAGGC CATTACTAGA TTTAAAGGGT TAGAGCTTAC AAGAGATTAT
ATAAGATCTC TTGTAAGAAA AGGCACAAGT AAAGTATCAG CCATTGTAGA AGTAAAGACA
AAAGATGGGT GGGTTATGAG AATTGCGGTA TTGGCAATAA CCACACATAG GATAGGCTCT
GCCCAAAAGT CGGCAATGAG AAAGAGAATG TTTGATGTAT TGACTAGGAA AGCCTCTGAA
ATGGACATAG GCCAATTCCT AAAGGAGGTG CTTGAAGGCT TACTTACGGC TGATCTCTTT
GTGGCAGGAA AGAAAATTGC CCCGCTGAGA AAGGTTGAGA TAGCTAAGAT AAAGGTGTTA
AAATACCCGC CAGAGGAGGA GCAAACCACG GTAAAAGAAT TAACAACAGA AACAGTAGCC
GCTTCTTAA
 
Protein sequence
MSEKQKAVAA QERVTISKRD PWALKKWFSV YAPSYLGGVF LAEVPASEPQ KLLLRTLEVS 
LFDITKDLSH LPIKLRFQIH KVDGLKAITR FKGLELTRDY IRSLVRKGTS KVSAIVEVKT
KDGWVMRIAV LAITTHRIGS AQKSAMRKRM FDVLTRKASE MDIGQFLKEV LEGLLTADLF
VAGKKIAPLR KVEIAKIKVL KYPPEEEQTT VKELTTETVA AS