Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pisl_0771 |
Symbol | |
ID | 4618043 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum islandicum DSM 4184 |
Kingdom | Archaea |
Replicon accession | NC_008701 |
Strand | + |
Start bp | 700107 |
End bp | 700775 |
Gene Length | 669 bp |
Protein Length | 222 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 639783865 |
Product | 30S ribosomal protein S3Ae |
Protein accession | YP_930290 |
Protein GI | 119872283 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1890] Ribosomal protein S3AE |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.97943 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 0.00503486 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTCTGAGA AGCAGAAAGC TGTAGCCGCA CAGGAGAGAG TTACAATTTC TAAACGAGAT CCTTGGGCAT TAAAGAAATG GTTCAGCGTA TATGCGCCTT CGTATCTTGG TGGAGTATTT TTAGCAGAAG TACCAGCCTC AGAACCTCAG AAGCTGTTGT TAAGAACTCT TGAAGTTTCG CTTTTTGACA TCACCAAGGA CTTGTCGCAT CTACCTATTA AATTGAGGTT TCAGATACAT AAAGTCGATG GCTTAAAGGC CATTACTAGA TTTAAAGGGT TAGAGCTTAC AAGAGATTAT ATAAGATCTC TTGTAAGAAA AGGCACAAGT AAAGTATCAG CCATTGTAGA AGTAAAGACA AAAGATGGGT GGGTTATGAG AATTGCGGTA TTGGCAATAA CCACACATAG GATAGGCTCT GCCCAAAAGT CGGCAATGAG AAAGAGAATG TTTGATGTAT TGACTAGGAA AGCCTCTGAA ATGGACATAG GCCAATTCCT AAAGGAGGTG CTTGAAGGCT TACTTACGGC TGATCTCTTT GTGGCAGGAA AGAAAATTGC CCCGCTGAGA AAGGTTGAGA TAGCTAAGAT AAAGGTGTTA AAATACCCGC CAGAGGAGGA GCAAACCACG GTAAAAGAAT TAACAACAGA AACAGTAGCC GCTTCTTAA
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Protein sequence | MSEKQKAVAA QERVTISKRD PWALKKWFSV YAPSYLGGVF LAEVPASEPQ KLLLRTLEVS LFDITKDLSH LPIKLRFQIH KVDGLKAITR FKGLELTRDY IRSLVRKGTS KVSAIVEVKT KDGWVMRIAV LAITTHRIGS AQKSAMRKRM FDVLTRKASE MDIGQFLKEV LEGLLTADLF VAGKKIAPLR KVEIAKIKVL KYPPEEEQTT VKELTTETVA AS
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