Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pisl_0768 |
Symbol | |
ID | 4617286 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum islandicum DSM 4184 |
Kingdom | Archaea |
Replicon accession | NC_008701 |
Strand | - |
Start bp | 696826 |
End bp | 697728 |
Gene Length | 903 bp |
Protein Length | 300 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 639783862 |
Product | radical SAM domain-containing protein |
Protein accession | YP_930287 |
Protein GI | 119872280 |
COG category | [R] General function prediction only |
COG ID | [COG2108] Uncharacterized conserved protein related to pyruvate formate-lyase activating enzyme |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 0.00853946 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGTATTACA ACAGGGTGTT TCGTGGAGAA TTTGCCAGAG GCTGCGAGCT CTGTTTACTA GGCGCTAAAA GTGTTATATT TATAACAGGT TTGTGCCCCC TTAGCTGTTT CTATTGTCCT GTTAGTAAGG AGAGGTTTGG AAAAGACGTA ATATATGTCA ACGACATCCC CGTGGATAAA ATAGAGGATA TACCAAAGGT GGTGGCTGAA TACTCTTCAG AAGGCGCGGC GATAACTGGC GGAGATCCGT CAGTTGTTGC TGAACGTGTT AAGATAGTTG CAGACCTCTT AAAGAGGGAG TTTGGCGAGG ATTTCCATAT CCACATGTAT ACACACATAC TAAATCTCGA TGGAAAGAGA GTTGGAATTA TAGCGTCAAG TAGAGTAGAT GAGGTGCGGA TACACATCAC ATCCGTTAAG CAACTTCAGG GCAGAGAAAA ATATGTAAAG GCGTTGGTCG CATCTGGTAA AACTATTGGT GCGGAGGTGC CAGCGTTGCC GGGCTTTGAA CAACAGATTG CTGAAGCTGT GAACGCCCTT GTGCCATACA TAAGTTTTGT AAATATAAAC GAGTTAGACA TCTCTGAGTC TAACTTAGAA AGGCTAAAGG CTATGGGCTA CAAAATCGAA GGCCATAGTG TATATGGTAG TTTAAAGGCG GCAGAGAGGA TAGCGGAGAT GGTGAAGGCG CCTGCACATA TATGTACTAG TAGGTATAAA GACACGATAC AGATTGGCAC ACGACTCTTT AGACACATGA TGACTATAGC AAAGCCCAAT AAATACGTCC AAGATGACGG CACTGTGATA TACGACGAGG ACGGGTACCA CCCCAACAGC TTAAATGCAA AGAAGATAAG AATTAAACTA AGCGTTGGCG TAAAAACGTT AGAAGTCCTC TAG
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Protein sequence | MYYNRVFRGE FARGCELCLL GAKSVIFITG LCPLSCFYCP VSKERFGKDV IYVNDIPVDK IEDIPKVVAE YSSEGAAITG GDPSVVAERV KIVADLLKRE FGEDFHIHMY THILNLDGKR VGIIASSRVD EVRIHITSVK QLQGREKYVK ALVASGKTIG AEVPALPGFE QQIAEAVNAL VPYISFVNIN ELDISESNLE RLKAMGYKIE GHSVYGSLKA AERIAEMVKA PAHICTSRYK DTIQIGTRLF RHMMTIAKPN KYVQDDGTVI YDEDGYHPNS LNAKKIRIKL SVGVKTLEVL
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