| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pisl_0713 |
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| Symbol | radA |
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| ID | 4617625 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum islandicum DSM 4184 |
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| Kingdom | Archaea |
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| Replicon accession | NC_008701 |
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| Strand | - |
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| Start bp | 648443 |
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| End bp | 649435 |
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| Gene Length | 993 bp |
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| Protein Length | 330 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 639783808 |
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| Product | DNA repair and recombination protein RadA |
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| Protein accession | YP_930234 |
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| Protein GI | 119872227 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0468] RecA/RadA recombinase |
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| TIGRFAM ID | [TIGR01954] transcription termination factor NusA, C-terminal duplication
[TIGR02236] DNA repair and recombination protein RadA |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 0.33185 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGTCTTCTA AGAAGAGAAA AGATGCCGAG GTTGCTCAAG CCAGAGTGGA GATAACCCCC
GACCTCGACG TAGAGGAACT TGAGGGCGTA GGGAGGGTGA CTGGCGCTAA GCTGAAGGAG
AGGGGGTTCT TCACCGTTAG AGATGTGGCT TTTGCCTCTG TTAAAGAGCT GGCAGAGATT
GTAGGCAATG AGGAGAGGGC ACAACAGATC GTGGAGGCGG CTAGAAAGAT GCTTGGTCTT
CACTCATTTG TCTCGGCTCT TGAGGTTTAT GAGAGAAGAA AAAAGATTAG GCGTATATCC
ACCGGCGTTA GAGCTCTTGA CGAATTACTA GGCGGAGGCA TTGAGACGCG TGCTGTGACC
GAGGTGGCTG GGGAGTTCGG CTCTGGGAAG ACACAACTCT GCCACCAGCT CGCCGTCATG
GTGCAGTTGC CCGAGGAGAG GGGCGGCCTC GGCGCAAAGG CCATATACAT CGACACCGAG
AACACCTTCC GTCCCGAGCG TATAATGCAA ATAGCGAAGG CCAGGGGGCT AGACCCCGAC
CAAGCCCTCA ACAACATCTT CTACGCCAGA GCCTACAGCT CAGACCACCA GATGATTCTA
GTGGATCAAG CCAAGTCTAT AATTAGACAA CACAACGTGG CGCTTCTCAT CGTAGACTCC
GTCATCGCCC ATTTCAGATC CGAGTTCCCG GGGAGGGAGA ACTTAGCCGA GAGACAACAG
AAGCTAAACA AACACGTGGC TGACCTCCTG CGTCTGGCGG ACGCCTACGA CGTGGCCGTG
GTGATTACGA ACCAGGTGAT GGCTCAGCCG GACGTCTTCT TTGGAAATCC GCTGAGGCCG
GCTGGAGGCA ATATTTTAGC ACACGGCGCC ACTTATCGTC TATGGCTTAG AAAGTCTAAG
GAGAACATCA GAATTGCAAA GATCTTTGAC AGCCCATATC ACCCAGAGGG CGAGGTCTCA
TTTAGAATTA CAGAGGAGGG TCTTGTCGAC TAA
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| Protein sequence | MSSKKRKDAE VAQARVEITP DLDVEELEGV GRVTGAKLKE RGFFTVRDVA FASVKELAEI
VGNEERAQQI VEAARKMLGL HSFVSALEVY ERRKKIRRIS TGVRALDELL GGGIETRAVT
EVAGEFGSGK TQLCHQLAVM VQLPEERGGL GAKAIYIDTE NTFRPERIMQ IAKARGLDPD
QALNNIFYAR AYSSDHQMIL VDQAKSIIRQ HNVALLIVDS VIAHFRSEFP GRENLAERQQ
KLNKHVADLL RLADAYDVAV VITNQVMAQP DVFFGNPLRP AGGNILAHGA TYRLWLRKSK
ENIRIAKIFD SPYHPEGEVS FRITEEGLVD
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