| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pisl_0711 |
|---|
| Symbol | |
|---|
| ID | 4617168 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pyrobaculum islandicum DSM 4184 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008701 |
|---|
| Strand | - |
|---|
| Start bp | 646215 |
|---|
| End bp | 647810 |
|---|
| Gene Length | 1596 bp |
|---|
| Protein Length | 531 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 639783806 |
|---|
| Product | radical SAM domain-containing protein |
|---|
| Protein accession | YP_930232 |
|---|
| Protein GI | 119872225 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1032] Fe-S oxidoreductase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.826726 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 42 |
|---|
| Fosmid unclonability p-value | 0.198807 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCATCTC TCAAATTTGA CGTGATCTTG ACCACAGATC GTTCGATGAT GTCAAACTAC
CACAGAAAGG AGTTCCTCGG CTTTGGCACC ACGGGGCCTG TTTTTGTAGA ACTCCCCTTT
GGCCTATCTG AAAGATTTCA CGCGTTTCTC TTTGCGCCTA AGGTAAAAGT AGATAGGTGG
GGTAGACCGC TAGAGGCGCC TTACGGCATG AGAAAGATAG AGGCAAAGTT GTTAGACGAG
GGTATAAACG CCGCTGTAAT AGATCCAGAT TATGTACATA GATACATCCC ATATGCCAAG
GTTTTGATGT TAAGCCACCA TGACTACTTT GGATTAAATC CGCCTAGTAG TACCTGGAGT
GTAATAGTAG GGAAAGAGCC CATGAACGCC ATGTTTTTCA AAAGATTTAT GGAGAAGATA
TCTCCACTTG TAAGAGAAGC GAAGACGAAA AATAAGTTAA AAGTAATCGC CGGAGGCCCC
GCCGCGTGGC AATGGCTTTA CTTTCCGGAG CTAGTTGAGA GATGGGGGAT AGATACAATA
TTTGATGGGG AGGGAGAAAA GCTGATAGTG GACCTTGTGA AAAACGCGTT GGAAGATAGG
CCACTGCCAA AGTATATCTA TGTGGGTGTG CATGAAGCTC CCGACCTATC AGAAATATCT
ACGATAAAGT ACCCAAGTAT AAATGGGCTT GTTGAAATAG GCCGCGGCTG TCCAAGAGGC
TGTGCCTTTT GTCCAGTGAC ACTAAGAGCG TTGAGATGGT ACCCCCTGGA TAAAATAGAG
GAGGAGCTAA AGGTAAATGC TAAAGCCGGT GTAGTAGATG GTATATTACA TGCAGACGAA
GTGCCGCTTT ATGGCTCTGC CGGAGTTGAG CCAAATCCAG AAAGGTTGAT TGCGTTACAT
AAGCTTGCAA AACGGTACTA CCGGAAGGTG GGATGGAGCC ATTCTACATT TGTAGCAGTG
TACCATGGCG AGAAAAAAAT GGGAAGACTC TTTACAAAAC TCTCAGAGAT AATAATAGAT
GAACATCAAG ACTGGTGGGG GGCGCAGATA GGTCTTGAAA CAGGCTCTGT CCGTCTAGCA
CAAAAGATAA TGCCAGGTAA AGCAGCGCCT TATAAAATCA GCCAGTGGCA TGAAATTGTG
ACAGAGGCTG CGGCTATAAT GCACGAAATT AGACTTATAC CCGCTATAAC GCTCATTGTA
GGACTTCCCG ACGAACAACC AGACGATGTT ATAGAAACTA TAGAGCTTGT CGAAAAGCTC
AAGCCCTACA GAAGCCTTAT TGTGTCATTA TTTTACGTCC CAATGAGCCA TGTGAAAAGC
GAAAAGACGG GTTGGTTAGA CAAGGTTAAT CTATACCCCG AACACATTGA CTTGCTAAAG
GTAGTCGCTA GGCATTCTAT CTTCTGGGCT AAAGACATTG TAAACAAATT CTATCTAAAG
GGACCGCAGT ACGCCCTAGT GAAATTCCTA ATAAACTACT TCATAAGTTA TGTTGAAAAA
AGGATAGATA AGATCGAAGA AGATATTGAA CAATACAAAG AAATTCTTAG ACAAACAAGA
GCTAAGTCGA GGAAGGAAGT GCTAACATAT ACCTAA
|
|---|
| Protein sequence | MPSLKFDVIL TTDRSMMSNY HRKEFLGFGT TGPVFVELPF GLSERFHAFL FAPKVKVDRW
GRPLEAPYGM RKIEAKLLDE GINAAVIDPD YVHRYIPYAK VLMLSHHDYF GLNPPSSTWS
VIVGKEPMNA MFFKRFMEKI SPLVREAKTK NKLKVIAGGP AAWQWLYFPE LVERWGIDTI
FDGEGEKLIV DLVKNALEDR PLPKYIYVGV HEAPDLSEIS TIKYPSINGL VEIGRGCPRG
CAFCPVTLRA LRWYPLDKIE EELKVNAKAG VVDGILHADE VPLYGSAGVE PNPERLIALH
KLAKRYYRKV GWSHSTFVAV YHGEKKMGRL FTKLSEIIID EHQDWWGAQI GLETGSVRLA
QKIMPGKAAP YKISQWHEIV TEAAAIMHEI RLIPAITLIV GLPDEQPDDV IETIELVEKL
KPYRSLIVSL FYVPMSHVKS EKTGWLDKVN LYPEHIDLLK VVARHSIFWA KDIVNKFYLK
GPQYALVKFL INYFISYVEK RIDKIEEDIE QYKEILRQTR AKSRKEVLTY T
|
|---|
| |