| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pisl_0610 |
|---|
| Symbol | |
|---|
| ID | 4616565 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pyrobaculum islandicum DSM 4184 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008701 |
|---|
| Strand | + |
|---|
| Start bp | 560042 |
|---|
| End bp | 560464 |
|---|
| Gene Length | 423 bp |
|---|
| Protein Length | 140 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 639783704 |
|---|
| Product | thioredoxin domain-containing protein |
|---|
| Protein accession | YP_930131 |
|---|
| Protein GI | 119872124 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG3118] Thioredoxin domain-containing protein |
|---|
| TIGRFAM ID | [TIGR01295] bacteriocin transport accessory protein, putative |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.0000000188847 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | GTGGACGAGA TAGATAGGTT GCTATGGAAA AAAGCGGTTG AGATAACTAG CAGAAAAACG
CAGAAATGCT GTCTAGTGAG CTATACGCCT GGCCATGTCT TGTCTGATGT TTCACAATTT
AAAAACGCCG TGATGGGGTG TAGAGTAACT TTTGTCATGT TTTTTGGCAA AACATGTCCC
TATTGTCAAA TGTTCGACCC GATCTTTAGA TATATAGGAG AGAAATATCG TGAATATGCA
AATTTTGTAA AAGCAGATAT AGAGGAGTTC TACAATATAG CGATTCGACT AGGTATAATG
GCGACGCCGA CCACTGTGGC TTTTTTAAAT GGACAGCCCA TAGAGGTGGC ACCAGGCTTT
ATGACGGCTC CGCAGTTCAA GACATTTGTA GAAACTGTAC TTAGCCACGC CGGTTGTAAA
TAG
|
|---|
| Protein sequence | MDEIDRLLWK KAVEITSRKT QKCCLVSYTP GHVLSDVSQF KNAVMGCRVT FVMFFGKTCP
YCQMFDPIFR YIGEKYREYA NFVKADIEEF YNIAIRLGIM ATPTTVAFLN GQPIEVAPGF
MTAPQFKTFV ETVLSHAGCK
|
|---|
| |