Gene Pisl_0608 details

Gene Information

• Locus tag: Pisl_0608
• Symbol: rpl6p
• ID: 4616607
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pyrobaculum islandicum DSM 4184
• Kingdom: Archaea
• Replicon accession: NC_008701
• Strand: +
• Start bp: 558305
• End bp: 558895
• Gene Length: 591 bp
• Protein Length: 196 aa
• Translation table: 11
• GC content: 42%
• IMG OID: 639783702
• Product: 50S ribosomal protein L6P
• Protein accession: YP_930129
• Protein GI: 119872122
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0097] Ribosomal protein L6P/L9E
• TIGRFAM ID: [TIGR03653] archaeal ribosomal protein L6P

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 18
• Fosmid unclonability p-value: 0.0000000239568
• Fosmid Hitchhiker: Yes
• Fosmid clonability: hitchhiker

Sequence

Gene sequence

ATGCATGTAG TATATAGCGT GGAGGAGGTT GAGATTCCTC AAAATGTTAA AGTAAGTGTC 
GAGAAGATTG GGCCGTTTGA TTATGTAGTT AAAGTGAAGG GGCCTCTTGG CGAAATTACC 
AAGGAGTTTA GAAATACGCC GGTGGTTATG AATTTAAGAG ATGGAAAGGT AGTGCTTGAA 
GTATTTAACG CTAGAAAAAA AGAGTATGCC ATCCTTGGCG CTTACAAAGG CATTCTTAGA 
AATATGTTTC TTGGAGTCAC CAAGGGCTGG AGGTACAAGC TGAAGGTTAT ATACACGCAC 
TTTCCTATGC TTGTAAAAGT GCAGGGAAAT CAACTAATAA TTGAGAATTT CCTTGGAAGA 
AAGTCAAAAA TCGTACTTAC AATACCCAGT GGTGTAAAGG TAGAAGTAAA AGGCAAGGAG 
GATATAATAG TAGAGGGCGT AGATAAAGAT CTTGTTAGCC AATTTGCGGC TACGATACAG 
TCGGCCGTAG AGTTGAGAGG AGACGAGAGG CCCTCTCCAC ACGGCCGCGA AGGCGGTTTA 
GGCATTGTCG ACGGAATCTA CGTCGTTGGA TATGAACATA TTAAAAGTTA A 

 

Protein sequence

MHVVYSVEEV EIPQNVKVSV EKIGPFDYVV KVKGPLGEIT KEFRNTPVVM NLRDGKVVLE 
VFNARKKEYA ILGAYKGILR NMFLGVTKGW RYKLKVIYTH FPMLVKVQGN QLIIENFLGR 
KSKIVLTIPS GVKVEVKGKE DIIVEGVDKD LVSQFAATIQ SAVELRGDER PSPHGREGGL 
GIVDGIYVVG YEHIKS