| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pisl_0592 |
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| Symbol | |
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| ID | 4617957 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum islandicum DSM 4184 |
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| Kingdom | Archaea |
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| Replicon accession | NC_008701 |
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| Strand | + |
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| Start bp | 541191 |
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| End bp | 542534 |
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| Gene Length | 1344 bp |
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| Protein Length | 447 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 639783682 |
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| Product | extracellular ligand-binding receptor |
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| Protein accession | YP_930113 |
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| Protein GI | 119872106 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.944632 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.0000426056 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCATCAA AAATACTATA CATAGGAATA GCAGTTGTAG TGGTAATACT AGTCGCAATA
GTCGCTATTT TAGCAACAGG CGGTAAACAG ACCGCGCCAA CCACGCCAAC GCCCCTTACG
CCAAGTCCAA CACAAACGCC GAAGCCTACA CCAACTCCCA CACCATCTCC CTCACCTACC
CCAGTTAGGA AAGTTGTCTA CATTGGTGCT GCGTTGCCTT TGACTGGTGG TCTGCAGTCC
TACGGCATTG GTGTTAAGAA TGCTGTTGAG TTGGCTGTGG AGGATGCCAA TAGGATGTGT
CCCAGCTATA GGTTTGAGCT TCTTGTGGAA GACACTGGGA CTAATCCGCA GCAGGCTCTT
CAGAAGGTGC AGGTCTTGTA TGCTAAAGGT GTGCGTTTTG TTGTAGGGCC TATGGCCAGC
GGAGAGGTTA AAGCAGTAAA GCCTTTCGCC GACCAGAACA AGATCATAAT CTTCAGCCCC
TCCTCCACCT CGCCAGCTCT GGCAATACCC AACGACTGGG TCTATAGGAT AGTGCCTACG
GACTTCGCCC AGGCGGCGGC GATAGCCGAC CTCCTAAAGC AACTGGGCGT TAAGAAGGCC
GTCATCCTCT ATAGAAACGA CGAGTGGGGC GTCGGCCTTA AAGACGCCAT AACTAAGGAG
GCTGAGAAAC TCGGCATACA GATCGCCTCA GCGCAAGGCT ACGACCCAGA CCCCAAGGCC
TTCCCCACCG CAATTCCAGA AGTTGTTAGA AAGCTCTCAG CCGCCCTCGG CCAGCCGAGT
GGCGACTCTG CAGTTATATT TGTGACTTTT GAAGACGACG GCGTGGTGGC TATGCAATCC
GCGGCGCAAG ACCCAGTCCT CGGCAAGGTC AGATGGATTG GCACAGACGG CATTGCCTAC
AGCGACGCCT TGATTAAACA GGTTGGGAAA GAGATGGCGG CCCGTAAGTT GCTCGGCACT
ATCACCGCCC CAGACCCCAA CGACCCCAAG TACCAGGAGT TCAAGAAGGA GTACAGGGCT
AAATACGGCA GAGAGCCTGT GGCCTACGAC CCATATGGCT ACGACGCCGC CATGATGCTA
ATGCAGATAA TCTGCAAGAC CGGCACAGAC GACCCAGAGA AAGTACGCGC CACCCTAGAG
CAGTGGGGTA AAGAAGGCAC ATACCAAGGC GCCACAGGCA AGGTATATCT AGACCAGGCG
GGAGACCGCG CCTACCCCAA CTACGTGATA TGGGGCGTCG CCATCGTCAA CGGCACAGCT
AAATACGTGG ACGCTGCCTA CTACTACGGC GCAGAGAGGA GGATCACAAT CTTTGACCAG
GGCAAGTCTC TATTCCAGAG TTAA
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| Protein sequence | MASKILYIGI AVVVVILVAI VAILATGGKQ TAPTTPTPLT PSPTQTPKPT PTPTPSPSPT
PVRKVVYIGA ALPLTGGLQS YGIGVKNAVE LAVEDANRMC PSYRFELLVE DTGTNPQQAL
QKVQVLYAKG VRFVVGPMAS GEVKAVKPFA DQNKIIIFSP SSTSPALAIP NDWVYRIVPT
DFAQAAAIAD LLKQLGVKKA VILYRNDEWG VGLKDAITKE AEKLGIQIAS AQGYDPDPKA
FPTAIPEVVR KLSAALGQPS GDSAVIFVTF EDDGVVAMQS AAQDPVLGKV RWIGTDGIAY
SDALIKQVGK EMAARKLLGT ITAPDPNDPK YQEFKKEYRA KYGREPVAYD PYGYDAAMML
MQIICKTGTD DPEKVRATLE QWGKEGTYQG ATGKVYLDQA GDRAYPNYVI WGVAIVNGTA
KYVDAAYYYG AERRITIFDQ GKSLFQS
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