Gene Pisl_0567 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_0567 
Symbol 
ID4617529 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp523149 
End bp524159 
Gene Length1011 bp 
Protein Length336 aa 
Translation table11 
GC content43% 
IMG OID639783657 
Productaminotransferase, class V 
Protein accessionYP_930088 
Protein GI119872081 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0075] Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.358497 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.00213924 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAGTATC TAACGCCAGG GCCGGTACAA TTGCCGAAGT TTGTAATAGA TGCGATGGCA 
AAACAACCAC CGTTTCACCG AGATAGCGAA TTTAAAAAGT TGTTCAAATC TGTATTAGAT
AAACTACACT CATTGTATCC AACTAGAGCC GTAGTGATGC CTGGCACAGG TACTCTAGCT
GTTGATACAA TGATATACAA TTACGTAAAC CCTGGGGACA AAATACTTGC GCTTGTCTAT
GGTGAGTTTG GAAAACGGGC TGTAGAGACG GCTAAGATTA GAGGCGCAAA TGTGGTTGAA
ATTGAGCAAG ACAAGCCGCC AGCTCCCGAC GAAGTTGAAG ACATCTTGCG GAGAGATCGT
GAAATTAGGG CTCTGTTGTT GATACACAAT GAGACTAGCA CTGGTATCGC CTATAAGCAA
CTAAAGAAGC TTATCGATAT TACAAAGTCG TATAACGTCC TTCTTCTTGT AGACAGCGTC
TCTGGATTTC CTGCAGAGCC TCTTCCACAG GACATCGATG TTGTTGCGAC GGCGTCGCAC
AAAGCGCTTT TAGCGCCCCC AGGGGCCTCC ATCTTATACC TCTCTACAGA ACCAAAGGCA
GAGACAGGCG TACCTCCTTC TATGAACTTA AGAAAGTTCA TAAAAATGTT AGATAATCTA
GAAACGCCGT ATACTCCACC GATTTCTATA CTCTTCGCCC TAGACGTTTC CCTGAGTTAT
ATACTGGAAC TAGGGCCTAA GTATGTAGAT ATCCACAGGG AGAGAGTAGA ATATCTATAT
TCTGCGCTGA AGTTAAGACC TATTCCGCCA GCCGGTTTAC GTAGTTTTAC AGTAACGGCT
TTCTATTGTG AAAAGCCAAA AGAAATCATT GCTAAACTAA AGGAGGCGGG GTACGTCATC
TCAGGCGGTA TGTACAAATA TAGAGAAAAA TCAATTAGAA TAGGTGTAAT GGGAGATATA
ACCATGGAGG ATCTAAGAAG AGTTGTTGAT ATAATTAATC GTGTGGATTG A
 
Protein sequence
MKYLTPGPVQ LPKFVIDAMA KQPPFHRDSE FKKLFKSVLD KLHSLYPTRA VVMPGTGTLA 
VDTMIYNYVN PGDKILALVY GEFGKRAVET AKIRGANVVE IEQDKPPAPD EVEDILRRDR
EIRALLLIHN ETSTGIAYKQ LKKLIDITKS YNVLLLVDSV SGFPAEPLPQ DIDVVATASH
KALLAPPGAS ILYLSTEPKA ETGVPPSMNL RKFIKMLDNL ETPYTPPISI LFALDVSLSY
ILELGPKYVD IHRERVEYLY SALKLRPIPP AGLRSFTVTA FYCEKPKEII AKLKEAGYVI
SGGMYKYREK SIRIGVMGDI TMEDLRRVVD IINRVD