Gene Pisl_0555 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_0555 
Symbol 
ID4617193 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp513984 
End bp514433 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content41% 
IMG OID639783645 
ProductNUDIX hydrolase 
Protein accessionYP_930076 
Protein GI119872069 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1051] ADP-ribose pyrophosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value0.00430973 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGTTAAGA AATGTGTCGT TGCTAGCGGT GTATTGATAA GGGACGACAG AGTCTTAATG 
GTAAAACACA GGCGACTTGG CGTATATCTC TACCCAGGCG GGCATGTGGA AGAGGGAGAA
ACTCCTATAG AAACTCTTGT GAGAGAGTTT GAAGAAGAAA CGGGCTTAGT AGTAGAGCCC
ATAGGATATG TTCACGGCAT AAAAGACGAT AATGTTGTTG AAAGGCCGCT TCCCTTTGTC
ATATTAGAGG AGGTTGTACA ATACCCAGAG GAGGTGCATA TACATTTCGA TCTCATTTAC
TTAGTAAGAG AGGTGGGAGG TGTTCTAAGA AGTGGCATGT GGATTGACAT ATCAGATATA
GACAGCATAG AGACGTATCC AAATGTGCGA AATGTAATAA AATTGGCTAC AAGAGCTATA
AATACTCTAT ATAGAGGGAA GAACGTTTAA
 
Protein sequence
MVKKCVVASG VLIRDDRVLM VKHRRLGVYL YPGGHVEEGE TPIETLVREF EEETGLVVEP 
IGYVHGIKDD NVVERPLPFV ILEEVVQYPE EVHIHFDLIY LVREVGGVLR SGMWIDISDI
DSIETYPNVR NVIKLATRAI NTLYRGKNV