| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pisl_0504 |
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| Symbol | |
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| ID | 4618050 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum islandicum DSM 4184 |
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| Kingdom | Archaea |
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| Replicon accession | NC_008701 |
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| Strand | + |
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| Start bp | 470104 |
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| End bp | 471354 |
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| Gene Length | 1251 bp |
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| Protein Length | 416 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 639783592 |
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| Product | extracellular ligand-binding receptor |
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| Protein accession | YP_930025 |
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| Protein GI | 119872018 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 0.273135 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAACAG GGGGTCAAGC CCCCTCTGCG ACAACTACTC CTACGCCAAC GCAAACACTT
ACTACGTCTC CTCCAACAGC CCAGAAAGTT TTCAAACTAG GCGCCTTACT ACCCCTTACT
GGCGGTTTTA GTAGCTATGC TAAGTTGGCG CAATGCGCCG CACAACTAGC CATAGATGAC
CTCAACTCGG AATACGCAAA TAAGGGGTAT AAGTTCGAAC TATATGTAGA AGATACACAG
CTAGATCCTA ATGTTGCATT ACAAAAACTA CAGACGTTAT ATGCAAAGGG CGTAAGAGCC
GTCCACGCGG GTCTCACAAG TAGAGAGGCT TCTGGAGAAA AGCCTTTTGC AGATCAGAAC
AAGATTATCC TATTTAGCGC GTGGTCTACC TCTTCTCTAC TCGCCATACC TAACGACTGG
CTGTATAGAA TTGTGGGTAC AGACGCCAAA CAAATAAGAG CAATAGGCGC TATTTTAAAA
GAGCTAGGTG TAAAAAATGT CGCCTTAATA TATAGAAAAG ACCCCTATGG AGAGGGTCTA
TATATTGAGT TACAAAAAGA GGCTACAAGA CGCGGCTTTA AGCTCGTCTC AGTGGCAGCC
TACGACCCAG ATCCTAAGGC GTTTCCACAA GCCGCGCCTG AGGCTGTTAG GAAGATATCT
GCCGAAGTTA AAGACCTCGT GGGGCCGGAC TTTGCGCTTG TAATCGTTTC TTTTGAAGAC
GACGGCGCCG TAGTACTTAA AGCAATAGGC CAAGACCCCA TTTTATCAAA AGCCAGGTTA
ATAGGTACTG AGGGCATGGC ATTTTCTCCC ATATTACTAC AGGAAGGCGG GGCTGTGATG
GCAAAGGGCA AAATAGTGGG CACGGCCAAT TGGGCGCTTC CAACTACGCC TGAGTACAAG
GAGTTCTACA GAAAGTTCAA GGCTAAATGT GGAGCAGAGC CTATAACACC AGCTCCTCAA
TCTTATGATG TAATTAAAAT GCTTGGCGAA ATAATGGCCT CGATAGGCAC AGACGATCCA
GACAAGGTAC GCACCACACT AGAACAATGG GGTAGAGAAG GCCGCTACAA GGGCGCCACA
GGCGTGGTTA TCCTAGATGA AAACGGAGAT AGAGCTAATC CGAACTTCTT ACTATGGGGC
GTCACTATAA AGAACGGCAC CTCTACGTAT ATAGAAGTGG GATATTATGA CTACGATAAA
GACTCTATAG AGTTCACTCC AGAAGGTAAA CAGTACTTCT ACGGAAAGTA A
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| Protein sequence | MSTGGQAPSA TTTPTPTQTL TTSPPTAQKV FKLGALLPLT GGFSSYAKLA QCAAQLAIDD
LNSEYANKGY KFELYVEDTQ LDPNVALQKL QTLYAKGVRA VHAGLTSREA SGEKPFADQN
KIILFSAWST SSLLAIPNDW LYRIVGTDAK QIRAIGAILK ELGVKNVALI YRKDPYGEGL
YIELQKEATR RGFKLVSVAA YDPDPKAFPQ AAPEAVRKIS AEVKDLVGPD FALVIVSFED
DGAVVLKAIG QDPILSKARL IGTEGMAFSP ILLQEGGAVM AKGKIVGTAN WALPTTPEYK
EFYRKFKAKC GAEPITPAPQ SYDVIKMLGE IMASIGTDDP DKVRTTLEQW GREGRYKGAT
GVVILDENGD RANPNFLLWG VTIKNGTSTY IEVGYYDYDK DSIEFTPEGK QYFYGK
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