| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pisl_0465 |
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| Symbol | rpl1P |
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| ID | 4618299 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum islandicum DSM 4184 |
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| Kingdom | Archaea |
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| Replicon accession | NC_008701 |
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| Strand | + |
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| Start bp | 439717 |
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| End bp | 440385 |
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| Gene Length | 669 bp |
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| Protein Length | 222 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 639783550 |
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| Product | 50S ribosomal protein L1P |
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| Protein accession | YP_929986 |
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| Protein GI | 119871979 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0081] Ribosomal protein L1 |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.464703 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 64 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCGCCG TAATTAATAA AGAGGTTCTA CTTTCAAAGA TTAAAGAGGC GTTGAGAAAC
GGAAAGCCGA GAAGGTTTAG ACAGAGCGTA GAGCTTATTG TAGTATTAAG AGATGTGGAT
TTGAACAAGC CTGAGAATCG TATAAATCTA TTGGTTGAGC TCCCCCATCC ACCTAAGCCT
AACAAAGTAG CTGCCTTTGC GCATGGCGCA TTTGAAACAC AAGCTAAAAA TGCCGGCGTA
GACGCGATAA TTACAAGAGA TCAAATAGAG TCTTTAGCTG GGAATAAGAG AGCTATTAGA
AAACTTGCAA AACAATACGA CTTCTTTATA GCTCCGCCTG ATCTAATGCC TTTGCTAGGC
AGAGTGATAG GTCCCATATT TGGCCCCAGA GGCAAAATGC CGGAGGTCGC ACCGCCTAAT
GTAGACATAA AAGCGCTTGT AGAAAGACTA AAGCGGTCTG TAAGAGTTAG GCTTAGAAAC
GAGGCCGTGG TAAAAGTCAG AGTTGGATCT GAGACCCAGA AGCCTGAAGA GATTTTAGAA
AATATCCTTG TAATACTTGA GGAACTCAAT AGGAGGTTCC CACTACGCCA ACACTTAAGG
GGGATCTATA TCAAAAAGAC AATGGGGCCT CCCGTAGTCG CTAGGGCTCT GGAGGTTTTA
GTTCGCTAA
|
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| Protein sequence | MSAVINKEVL LSKIKEALRN GKPRRFRQSV ELIVVLRDVD LNKPENRINL LVELPHPPKP
NKVAAFAHGA FETQAKNAGV DAIITRDQIE SLAGNKRAIR KLAKQYDFFI APPDLMPLLG
RVIGPIFGPR GKMPEVAPPN VDIKALVERL KRSVRVRLRN EAVVKVRVGS ETQKPEEILE
NILVILEELN RRFPLRQHLR GIYIKKTMGP PVVARALEVL VR
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