Gene Pisl_0410 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_0410 
Symbol 
ID4617423 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp396784 
End bp398334 
Gene Length1551 bp 
Protein Length516 aa 
Translation table11 
GC content48% 
IMG OID639783490 
ProductXRE family transcriptional regulator 
Protein accessionYP_929931 
Protein GI119871924 
COG category[K] Transcription 
COG ID[COG1396] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones52 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGTATA AGCTTGGGAA TAGATTGTCT GAGCTGAGGA GGAGAAAGGG CCTCAGCCTT 
TCGCGGTTAG CTAGGTTGGC GGGTGTCTCG AAATCGACTT TGTGGGAGAT AGAAAATGAC
AAGATAAGCC CCTCCATCAA CACGCTCTGG GCCATCGCCA ACGCCTTAGG CGTTCCCTTT
GGCGAACTCG TGACATACGA CATAGTTGTT AAAGACGAGG GGGTTGAAGT TCGATTGATA
GAGCGTGTAG AGAACAAGGA GGTATACCTA ATGAAGCTGC GCTCCAACGC GATAAAGCGC
TCTGAACCCC ACAGGAACTC GCCAATGGAA GTAGTGCAAG TTATTAAAGG GGTGATGATC
GTCGGGAGCA GGGACAAGCT GTCGTTAGTT GGCGAGGGAG ATTTTGCGAA GTTCTACGGA
GGCAGGGAGC ACCTCTACAT GGCCGTAGGA GACGACGCGG AGGCCATCGT AACATTAATC
TATGGCTCAA AAGATGAATT ACCAACAATC GAGTATAAAA ACACAAGGAA AGTAAGTATT
CCCAGATATA GAGATTTAAT ATATGACGAG AACGTTGAAA ACAAATTTTT AAAGATGCTA
ATCGACGCAG TAAATAATCT CCAAACGGTT GAGGGGTTAG AGGAGAGTTT AACTGCCGAT
GTGCTTAATG CGGAAATCCT AACGCTTAGG GGGAAGTTGA CAATTCCCAA GGCGATAAAG
GAAGGCGTGA GAAAGTTCAG CCAAAACGCG TTATTAAGAA GATCATCATT TGAGCGGAAT
ATAGATCCAC TAAAATACCT TTTGTATGAG CCGCTACACC CAGGCTACGC GGAACAAGCA
GTCTACGTCG CATATGAGTT GGAGAAGAGG GGTATCAGAG ACGTTGTGAG CTTAGGCTGC
GGCCCGGCAT ATCATGAGAG GATGCTGACG GAGATATTGG ATTTAGGCAT AACCTGCGTA
GAGACTTCTA ACTTATTTAA AGCGATCTCC ACATTCCCAA CGCTTAATGA ATTACCGGAG
AAAACGGATG CGATTATCTC ATTCGGCTCC TCCCACCACA TAGACAACTT CCTCGAGCTG
ACCTCCAGCC GGCTGAGTAG GGGAGGGGTT TTGATAGTGG CTGACGAGTT TATAGACGAC
TTTGCCAGTG AAAGGGCGAG GAAGTTGAAC GTGGTTAAGC ACCACTTGGT GTATTTGCTC
GATATACCGC TGGAGACTTT TCGAGAGGAG TTGCTTTCAG CCTACAACGC GGCTGTTGAG
GGGAAATTGA GAGTTGCGCT AAACATTTTA TCTAAGGTTT ACGTCGATAT TAGCGAGGGG
ACAAAGGATG AGAATAGAGT TGACGAGGAA AAGGCCTTCC TGAACTTCTA CCACCTAGAG
CTGACATCGC TATTACTAGG CGTTATCGAA GAGAGGAAGA CTTCCGTTGC GAAGTTCATC
TCCGAAGCCG CCGAGCGTGG GCTGAGACTT GAATCTCACT ACAAAATCTA TTCGACGGGC
GAGGGGAAGC TGGGTGGTGG GACTCACGTG TTGGTGTTTA GAAGGGTATG A
 
Protein sequence
MEYKLGNRLS ELRRRKGLSL SRLARLAGVS KSTLWEIEND KISPSINTLW AIANALGVPF 
GELVTYDIVV KDEGVEVRLI ERVENKEVYL MKLRSNAIKR SEPHRNSPME VVQVIKGVMI
VGSRDKLSLV GEGDFAKFYG GREHLYMAVG DDAEAIVTLI YGSKDELPTI EYKNTRKVSI
PRYRDLIYDE NVENKFLKML IDAVNNLQTV EGLEESLTAD VLNAEILTLR GKLTIPKAIK
EGVRKFSQNA LLRRSSFERN IDPLKYLLYE PLHPGYAEQA VYVAYELEKR GIRDVVSLGC
GPAYHERMLT EILDLGITCV ETSNLFKAIS TFPTLNELPE KTDAIISFGS SHHIDNFLEL
TSSRLSRGGV LIVADEFIDD FASERARKLN VVKHHLVYLL DIPLETFREE LLSAYNAAVE
GKLRVALNIL SKVYVDISEG TKDENRVDEE KAFLNFYHLE LTSLLLGVIE ERKTSVAKFI
SEAAERGLRL ESHYKIYSTG EGKLGGGTHV LVFRRV