Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pisl_0410 |
Symbol | |
ID | 4617423 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum islandicum DSM 4184 |
Kingdom | Archaea |
Replicon accession | NC_008701 |
Strand | - |
Start bp | 396784 |
End bp | 398334 |
Gene Length | 1551 bp |
Protein Length | 516 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 639783490 |
Product | XRE family transcriptional regulator |
Protein accession | YP_929931 |
Protein GI | 119871924 |
COG category | [K] Transcription |
COG ID | [COG1396] Predicted transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 52 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAGTATA AGCTTGGGAA TAGATTGTCT GAGCTGAGGA GGAGAAAGGG CCTCAGCCTT TCGCGGTTAG CTAGGTTGGC GGGTGTCTCG AAATCGACTT TGTGGGAGAT AGAAAATGAC AAGATAAGCC CCTCCATCAA CACGCTCTGG GCCATCGCCA ACGCCTTAGG CGTTCCCTTT GGCGAACTCG TGACATACGA CATAGTTGTT AAAGACGAGG GGGTTGAAGT TCGATTGATA GAGCGTGTAG AGAACAAGGA GGTATACCTA ATGAAGCTGC GCTCCAACGC GATAAAGCGC TCTGAACCCC ACAGGAACTC GCCAATGGAA GTAGTGCAAG TTATTAAAGG GGTGATGATC GTCGGGAGCA GGGACAAGCT GTCGTTAGTT GGCGAGGGAG ATTTTGCGAA GTTCTACGGA GGCAGGGAGC ACCTCTACAT GGCCGTAGGA GACGACGCGG AGGCCATCGT AACATTAATC TATGGCTCAA AAGATGAATT ACCAACAATC GAGTATAAAA ACACAAGGAA AGTAAGTATT CCCAGATATA GAGATTTAAT ATATGACGAG AACGTTGAAA ACAAATTTTT AAAGATGCTA ATCGACGCAG TAAATAATCT CCAAACGGTT GAGGGGTTAG AGGAGAGTTT AACTGCCGAT GTGCTTAATG CGGAAATCCT AACGCTTAGG GGGAAGTTGA CAATTCCCAA GGCGATAAAG GAAGGCGTGA GAAAGTTCAG CCAAAACGCG TTATTAAGAA GATCATCATT TGAGCGGAAT ATAGATCCAC TAAAATACCT TTTGTATGAG CCGCTACACC CAGGCTACGC GGAACAAGCA GTCTACGTCG CATATGAGTT GGAGAAGAGG GGTATCAGAG ACGTTGTGAG CTTAGGCTGC GGCCCGGCAT ATCATGAGAG GATGCTGACG GAGATATTGG ATTTAGGCAT AACCTGCGTA GAGACTTCTA ACTTATTTAA AGCGATCTCC ACATTCCCAA CGCTTAATGA ATTACCGGAG AAAACGGATG CGATTATCTC ATTCGGCTCC TCCCACCACA TAGACAACTT CCTCGAGCTG ACCTCCAGCC GGCTGAGTAG GGGAGGGGTT TTGATAGTGG CTGACGAGTT TATAGACGAC TTTGCCAGTG AAAGGGCGAG GAAGTTGAAC GTGGTTAAGC ACCACTTGGT GTATTTGCTC GATATACCGC TGGAGACTTT TCGAGAGGAG TTGCTTTCAG CCTACAACGC GGCTGTTGAG GGGAAATTGA GAGTTGCGCT AAACATTTTA TCTAAGGTTT ACGTCGATAT TAGCGAGGGG ACAAAGGATG AGAATAGAGT TGACGAGGAA AAGGCCTTCC TGAACTTCTA CCACCTAGAG CTGACATCGC TATTACTAGG CGTTATCGAA GAGAGGAAGA CTTCCGTTGC GAAGTTCATC TCCGAAGCCG CCGAGCGTGG GCTGAGACTT GAATCTCACT ACAAAATCTA TTCGACGGGC GAGGGGAAGC TGGGTGGTGG GACTCACGTG TTGGTGTTTA GAAGGGTATG A
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Protein sequence | MEYKLGNRLS ELRRRKGLSL SRLARLAGVS KSTLWEIEND KISPSINTLW AIANALGVPF GELVTYDIVV KDEGVEVRLI ERVENKEVYL MKLRSNAIKR SEPHRNSPME VVQVIKGVMI VGSRDKLSLV GEGDFAKFYG GREHLYMAVG DDAEAIVTLI YGSKDELPTI EYKNTRKVSI PRYRDLIYDE NVENKFLKML IDAVNNLQTV EGLEESLTAD VLNAEILTLR GKLTIPKAIK EGVRKFSQNA LLRRSSFERN IDPLKYLLYE PLHPGYAEQA VYVAYELEKR GIRDVVSLGC GPAYHERMLT EILDLGITCV ETSNLFKAIS TFPTLNELPE KTDAIISFGS SHHIDNFLEL TSSRLSRGGV LIVADEFIDD FASERARKLN VVKHHLVYLL DIPLETFREE LLSAYNAAVE GKLRVALNIL SKVYVDISEG TKDENRVDEE KAFLNFYHLE LTSLLLGVIE ERKTSVAKFI SEAAERGLRL ESHYKIYSTG EGKLGGGTHV LVFRRV
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