Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pisl_0388 |
Symbol | |
ID | 4616798 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum islandicum DSM 4184 |
Kingdom | Archaea |
Replicon accession | NC_008701 |
Strand | + |
Start bp | 373013 |
End bp | 374101 |
Gene Length | 1089 bp |
Protein Length | 362 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 639783468 |
Product | geranylgeranyl reductase |
Protein accession | YP_929909 |
Protein GI | 119871902 |
COG category | [C] Energy production and conversion |
COG ID | [COG0644] Dehydrogenases (flavoproteins) |
TIGRFAM ID | [TIGR02032] geranylgeranyl reductase family |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 0.1431 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGATATATG ACGTTATAAT AGTAGGAGCT GGGCCCGCCG GCTCTACGGC TGCGTTAATG GCAAGAAGAC TCGGGCTAAA GACGTTGGTA ATAGATAGGG CGCAACCGCC GCGCGAAAAG CCTTGTGGAG GGGGGCTAAC GCCACGTACG TGGAAACTAT TGGAGAGACT TGGCATAGAG TATCCTGTAT ATGGCTCTTG TAAAAGTATA GAGACTAGAG CGGCAGGCTA TCGCCATGTG TTAAAAAAAG AGCCTATACT TATCACCAGA AGGCCGGACT TCGATTACGC CATACTTAAA CAAAGCGGCG TAGATTTTAT AAAAGACCAT ATATTAGGCG TAAGAGAGGG AGGTGTAGTT GGTAGAGCTG GCGAATACCA GGGCAGAGTT ATAATAGGCG CCGACGGCTC GACAAGCGTA GTGGCAAAAT CTATAGGCGT AAGAAATTTC CGCGGTGAGA AAAGCCACGC CATCGCATAT GTGACAATCG CCAAAGGGCC TACTTCCGAT ATATGTGTGA TAGACTTTGA CGCCGTGGTA AACAATACTG GGAGAGTTGG CTACGCTTGG ATTTTCCCCT TAGACCAAGG CGCTAATATC GGCGCAGGTG TGGGGTGGGG TAAATGGCTA GACCTCAGAA AGTTGGTTGT TGAATATGCA GAGAAAGAAG GCTATAAGCC AGGCCCAGTA CTAGGCCACC CAATATCTCT AGGCTACATA GCCGGCTTGG GGAGGCGAAA TGTAATACTT GCAGGAGAGG CGGCGGGTTT TGTCGACGCC ACAACAGGAG AAGGCATCTA TTACGCTATA GCAACTGGAG CCTTGGCAGC AGTAGCGGCA TATACTGCGC TTAAGATATA TGGCAATGAG AAATGGACTT TTGACATATA TAGCGAACTA GCTAAGCCAT ATGTAGAAGA AGTTAAAAAG ACAAGATGGC TTTCACATAT GGCGAGAACC CTCGGCGCAA GGAGATGGGT AGTTAAACTA TTAGGTAGGC GGTTGGTTGA GTTATATTCG AGAGTGTACA CAGGCGAAGC AACCTATAGC CTAACGCTAA AACCTGTGGA AAGACGGCTA AAGCTCTAA
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Protein sequence | MIYDVIIVGA GPAGSTAALM ARRLGLKTLV IDRAQPPREK PCGGGLTPRT WKLLERLGIE YPVYGSCKSI ETRAAGYRHV LKKEPILITR RPDFDYAILK QSGVDFIKDH ILGVREGGVV GRAGEYQGRV IIGADGSTSV VAKSIGVRNF RGEKSHAIAY VTIAKGPTSD ICVIDFDAVV NNTGRVGYAW IFPLDQGANI GAGVGWGKWL DLRKLVVEYA EKEGYKPGPV LGHPISLGYI AGLGRRNVIL AGEAAGFVDA TTGEGIYYAI ATGALAAVAA YTALKIYGNE KWTFDIYSEL AKPYVEEVKK TRWLSHMART LGARRWVVKL LGRRLVELYS RVYTGEATYS LTLKPVERRL KL
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