Gene Pisl_0349 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_0349 
Symbol 
ID4616295 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp344547 
End bp344873 
Gene Length327 bp 
Protein Length108 aa 
Translation table11 
GC content48% 
IMG OID639783429 
ProducttRNA-binding domain-containing protein 
Protein accessionYP_929870 
Protein GI119871863 
COG category[R] General function prediction only 
COG ID[COG0073] EMAP domain 
TIGRFAM ID[TIGR00399] methionyl-tRNA synthetase C-terminal region/beta chain 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones59 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGTTAG TTTCAATTGA CGAATTTAGA CGTATTGACC TTCGCGTGGG TAAGGTCTTA 
GAGGCGGCGA GAGTCGAGGG TTCTAGAAAG CTTATAAAAC TAGTGGTCGA CCTAGGTGCC
GAAAAGAGAC AGATCGTCGC CGGCTTGGCT GAGTATTACA AGCCTGAGGA TCTAGTGGGT
AAATACGTCG TGGTTGTGGC AAATCTAGAG CCCAAGAGAT TAATGGGCGT GGAGAGTCAA
GGAATGCTAC TTGCCACTTG TGACAAGCCT GTGCTTCTTA CAATAGAGAA GGGGGGTGAT
GAACATGTGG GAGAGCGGGT CTGTTAA
 
Protein sequence
MSLVSIDEFR RIDLRVGKVL EAARVEGSRK LIKLVVDLGA EKRQIVAGLA EYYKPEDLVG 
KYVVVVANLE PKRLMGVESQ GMLLATCDKP VLLTIEKGGD EHVGERVC