Gene Pisl_0347 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_0347 
Symbol 
ID4617580 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp343226 
End bp343846 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content48% 
IMG OID639783427 
Producthypothetical protein 
Protein accessionYP_929868 
Protein GI119871861 
COG category[S] Function unknown 
COG ID[COG0586] Uncharacterized membrane-associated protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones57 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGATTACG TCGGACTACT CGGCGTCTTC CTAGCGGTTT TTATATCGCA TTTCATACCA 
TTTATCCCAC TCCCCGGCTA CTTGGCCACA GTGACCTATG TTGCTACACA CAGTGACGCC
GTCAGTGTGA CAGCCGCCGT TTTAACGACG GCGCTTGGCG CAACTCTTGG AAAGGTGTTG
GTGTTTTTCT ACGGCTATGG AATTGGGAGA GTAGTCATGG GCGAGGAGTT TCAATACGCA
AAGAAGTTTT TTGATAAAAT ATCGAAATGG GGCATAGACG TGGCGGTCTT TATATTTGCG
ACATCTCCGT TGGCAGACGA CGTTTTATAT ATCCCTCTGG GAGCCGCCGG CTATAGCATA
AGGCGGTTTT TCCTCGCTGT ATTTGCTGGA AAGCTTCTTC TCGCCTCAGC CATAGCGTTA
TTTACAGACG CGGCGTTAAT GGCCGTTGAT AGATACCTAG GCGACGTTAG GCTGTCTATG
GCGATTGTAG CTGTGGCCAC TCTAGTGGTG ACGATATTAG TACTTAGGAT AAAGTGGTCA
AGAGTTCTCG TGGCGTATGA AAGCGGGGGG CTAAAGAGCG CTATACGTGA AGCTCTTAGA
TCAATAGTAA GGCAGAAGTA A
 
Protein sequence
MDYVGLLGVF LAVFISHFIP FIPLPGYLAT VTYVATHSDA VSVTAAVLTT ALGATLGKVL 
VFFYGYGIGR VVMGEEFQYA KKFFDKISKW GIDVAVFIFA TSPLADDVLY IPLGAAGYSI
RRFFLAVFAG KLLLASAIAL FTDAALMAVD RYLGDVRLSM AIVAVATLVV TILVLRIKWS
RVLVAYESGG LKSAIREALR SIVRQK