Gene Pisl_0330 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_0330 
Symbol 
ID4617170 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp328458 
End bp328901 
Gene Length444 bp 
Protein Length147 aa 
Translation table11 
GC content50% 
IMG OID639783409 
ProductNADH-quinone oxidoreductase, B subunit 
Protein accessionYP_929851 
Protein GI119871844 
COG category[C] Energy production and conversion 
COG ID[COG0377] NADH:ubiquinone oxidoreductase 20 kD subunit and related Fe-S oxidoreductases 
TIGRFAM ID[TIGR01957] NADH-quinone oxidoreductase, B subunit 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones72 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGGGGG CTATCTCTCA AGCTGTTTCT AGAGTGGCCA GATGGGGCAC GAAATGGTCT 
CTCTGGCCGC CACATTTAGT TACCGCTTGT TGTGGCGTCG AGTTTGCACA CACCTTTGGC
CCCGCTTATG ACGCCGAGAG ATTCGGCATG TTGCCTATAG GTAGCCTTAG GCAGAGCAAT
ATCCTAATCT TGGAGGGCAC TATAACGCTT AAGATGGCTA AATTTGTAAA ATATATATAC
GACCAAATGC CTGAGCCTAA GTACGTAATC GCCATGGGGG CCTGCGCCAT TAAGGGAGGC
GTCTTCTACG GGAGTTATCA CATGGTTCCC GCCTCCAAAG TTGTCCCAGT TAACGTATAC
GTCTCCGGCT GTCCGCCGAC TCCAGAAGCT GTTTTAAAGG CTGTAGAAAA GATACAGAAG
CAGATATACC ATGCAGAGAG TTGA
 
Protein sequence
MRGAISQAVS RVARWGTKWS LWPPHLVTAC CGVEFAHTFG PAYDAERFGM LPIGSLRQSN 
ILILEGTITL KMAKFVKYIY DQMPEPKYVI AMGACAIKGG VFYGSYHMVP ASKVVPVNVY
VSGCPPTPEA VLKAVEKIQK QIYHAES