Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pisl_0315 |
Symbol | |
ID | 4618320 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum islandicum DSM 4184 |
Kingdom | Archaea |
Replicon accession | NC_008701 |
Strand | - |
Start bp | 314273 |
End bp | 315013 |
Gene Length | 741 bp |
Protein Length | 246 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 639783393 |
Product | ABC transporter related |
Protein accession | YP_929836 |
Protein GI | 119871829 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0411] ABC-type branched-chain amino acid transport systems, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 73 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCACTCTG GGCACTTGTT GGTAGCTAGT GATATAGTAA AAAAATTCGG CGGGCTTACG GCGCTTGACG GTGCAACCAT CGCAGTACCC CTCAACTCTT TTGTTATTTT AGCAGGCCCC AACGGCTCTG GTAAAACCAC CTTACTTAAT GTAATCTCCG GTATTTATCA ACCAGACAGA GGCAAGGTGA TATTTGAAGG GCGTGATATC ACATACACAA AGCCGTATAT AAGGGCGCAA CTCGGCATCG CGAGAACTTT TCAAACGCCG CGTGTTGCAT ATAAAATGTC TGTGCTTGAC AACGTTATAT TTGGCTATGT AAGTAAAGAT GCTCCTCTTG ACTTTAGGTG GAAAGCGAGA GAGAGAGAAC TTGTCAAGAG GGCATTTGAG GTTTTAAAAT TAGTAAAACT TGACCATATG TGGGATAGGC CGGCAAGTCA ATTAAGTGGC GGCCAGTTAA AGCTTTTGGA AATAGCTAGG GCTTTAATGG CTAACTCTAA GCTTATATTA ATGGACGAGC CTGGCGCAGG GCTAAACCCC ACTCTTGCAC ATGAGCTTTT CCAATTTATG CGTGATTTAT CACGCCGAGG TTTTTCTCTC CTTGTTGTGG AACATAGGCT AGATATAGCA GCTGATTATG GCGATTATAT GTATGTGCTT TACAACGGCA GAGTGTTAGC AGAGGGAGAG CCGGCCGAAG TCTTATCTAA TCCACAGGTA ATTCAGGCGT TTATGCTATG A
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Protein sequence | MHSGHLLVAS DIVKKFGGLT ALDGATIAVP LNSFVILAGP NGSGKTTLLN VISGIYQPDR GKVIFEGRDI TYTKPYIRAQ LGIARTFQTP RVAYKMSVLD NVIFGYVSKD APLDFRWKAR ERELVKRAFE VLKLVKLDHM WDRPASQLSG GQLKLLEIAR ALMANSKLIL MDEPGAGLNP TLAHELFQFM RDLSRRGFSL LVVEHRLDIA ADYGDYMYVL YNGRVLAEGE PAEVLSNPQV IQAFML
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