Gene Pisl_0315 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_0315 
Symbol 
ID4618320 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp314273 
End bp315013 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content44% 
IMG OID639783393 
ProductABC transporter related 
Protein accessionYP_929836 
Protein GI119871829 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0411] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones73 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACTCTG GGCACTTGTT GGTAGCTAGT GATATAGTAA AAAAATTCGG CGGGCTTACG 
GCGCTTGACG GTGCAACCAT CGCAGTACCC CTCAACTCTT TTGTTATTTT AGCAGGCCCC
AACGGCTCTG GTAAAACCAC CTTACTTAAT GTAATCTCCG GTATTTATCA ACCAGACAGA
GGCAAGGTGA TATTTGAAGG GCGTGATATC ACATACACAA AGCCGTATAT AAGGGCGCAA
CTCGGCATCG CGAGAACTTT TCAAACGCCG CGTGTTGCAT ATAAAATGTC TGTGCTTGAC
AACGTTATAT TTGGCTATGT AAGTAAAGAT GCTCCTCTTG ACTTTAGGTG GAAAGCGAGA
GAGAGAGAAC TTGTCAAGAG GGCATTTGAG GTTTTAAAAT TAGTAAAACT TGACCATATG
TGGGATAGGC CGGCAAGTCA ATTAAGTGGC GGCCAGTTAA AGCTTTTGGA AATAGCTAGG
GCTTTAATGG CTAACTCTAA GCTTATATTA ATGGACGAGC CTGGCGCAGG GCTAAACCCC
ACTCTTGCAC ATGAGCTTTT CCAATTTATG CGTGATTTAT CACGCCGAGG TTTTTCTCTC
CTTGTTGTGG AACATAGGCT AGATATAGCA GCTGATTATG GCGATTATAT GTATGTGCTT
TACAACGGCA GAGTGTTAGC AGAGGGAGAG CCGGCCGAAG TCTTATCTAA TCCACAGGTA
ATTCAGGCGT TTATGCTATG A
 
Protein sequence
MHSGHLLVAS DIVKKFGGLT ALDGATIAVP LNSFVILAGP NGSGKTTLLN VISGIYQPDR 
GKVIFEGRDI TYTKPYIRAQ LGIARTFQTP RVAYKMSVLD NVIFGYVSKD APLDFRWKAR
ERELVKRAFE VLKLVKLDHM WDRPASQLSG GQLKLLEIAR ALMANSKLIL MDEPGAGLNP
TLAHELFQFM RDLSRRGFSL LVVEHRLDIA ADYGDYMYVL YNGRVLAEGE PAEVLSNPQV
IQAFML