Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pisl_0303 |
Symbol | |
ID | 4616661 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum islandicum DSM 4184 |
Kingdom | Archaea |
Replicon accession | NC_008701 |
Strand | - |
Start bp | 304030 |
End bp | 305187 |
Gene Length | 1158 bp |
Protein Length | 385 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 639783381 |
Product | peptide chain release factor 1 |
Protein accession | YP_929824 |
Protein GI | 119871817 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1503] Peptide chain release factor 1 (eRF1) |
TIGRFAM ID | [TIGR00108] peptide chain release factor eRF/aRF, subunit 1 [TIGR03676] peptide chain release factor 1, archaeal and eukaryotic forms |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 77 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTTTTA AAAGGCCGCC AAATGGCGTT TACTACATCA AGACGCCAGT GGAACTTAGG GCTTTCATAA ATCTCTTGAA GAAATTTAGA GGCTACGCCA CGACGTTGAT CACCCTCTAT ATAAACTCGG AGAGGCCGAT ACCAGACGTG GTCAACCTTC TCAGGTCGGA GTGGTCTACT GCTTCTAACA TCAAAGACAA GACCACCAGG ACCCATGTCC AGGACACACT AGAGCGTATA ATAAACAACC TGAAGGGGGA GGCTAAGGCA CCTGAAAACG GCATGGCTAT TTTCGCGGGG TTCCATATGA TAAATCAGGG AAATTACGAG TGGGTCTATT ACGTCGTCGT GCCTCCTCAG CCGATCTACA CTTTTAAGTA CATATGCGAT ACGGCTTTCC ATACCGAGAT ACTGGAGGAC CAGATACACG CCGGCGTTGT ATACGGTATT GTCGTCGTAG AGAGGGGGGA GGCTGTCATT GCGCTTCTAA AGGGAGGGCA GTGGGAGGTT GTGAAGACTG TGGAGTTCTT CGTGCCGGGT AAACACCACG CCGGCGGCCA GTCGGCGAAT CGCTTCAAGC GGCAGACGGA GCACTTGGCG GAGACCTTCT ACAAGGTGCT GGCCGAGGAG GTGAACAAGA TCTTCCTCCA GATACCGACG CTGAAGGGCA TAATAGTGGC AGGGCCAGGC CCCACCAAGG AGGACTTCCT AGAGGAGGGA GGTCTCGACT ACAGGCTCAA GGACAAAGTT CTAGCGGTGG TGCCGGCTTG TTGCGCCAAC GAATACGGCG TGATAGAGGC GATAAAAAAC GCCCAGGAGC AGCTCAAGGA GAGCGAATAT GTCCACGCCA AGGAGGTCAT GGAAAAGGTG ATGTACTATG CAGTGAGAAA GAGCGACTAT ATAGTATACG GCAAAGAGAG GGCGCTTAAA GCTCTAGAGA TGGGGATGGC AGAGGTTCTA GTCGTGGCCG AGGAACTCGG CGAAGACGCA GTTCTAGAGG TGATCATGAA GGCGGAGGAG AAGGGAGTTA AGGTAGAGGT TGTGCCAAAG GGCGTCGAGG AGTCTAAAAC GCTGATGCAA GCCTTCGGCG GATACGTGGC GCTTCTCTCC ACTCCAGTGT GGGTATTGGA GCAACAGATC CAGGCAGAGG CGGCGTAG
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Protein sequence | MSFKRPPNGV YYIKTPVELR AFINLLKKFR GYATTLITLY INSERPIPDV VNLLRSEWST ASNIKDKTTR THVQDTLERI INNLKGEAKA PENGMAIFAG FHMINQGNYE WVYYVVVPPQ PIYTFKYICD TAFHTEILED QIHAGVVYGI VVVERGEAVI ALLKGGQWEV VKTVEFFVPG KHHAGGQSAN RFKRQTEHLA ETFYKVLAEE VNKIFLQIPT LKGIIVAGPG PTKEDFLEEG GLDYRLKDKV LAVVPACCAN EYGVIEAIKN AQEQLKESEY VHAKEVMEKV MYYAVRKSDY IVYGKERALK ALEMGMAEVL VVAEELGEDA VLEVIMKAEE KGVKVEVVPK GVEESKTLMQ AFGGYVALLS TPVWVLEQQI QAEAA
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