Gene Pisl_0303 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_0303 
Symbol 
ID4616661 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp304030 
End bp305187 
Gene Length1158 bp 
Protein Length385 aa 
Translation table11 
GC content53% 
IMG OID639783381 
Productpeptide chain release factor 1 
Protein accessionYP_929824 
Protein GI119871817 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1503] Peptide chain release factor 1 (eRF1) 
TIGRFAM ID[TIGR00108] peptide chain release factor eRF/aRF, subunit 1
[TIGR03676] peptide chain release factor 1, archaeal and eukaryotic forms 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones77 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTTTTA AAAGGCCGCC AAATGGCGTT TACTACATCA AGACGCCAGT GGAACTTAGG 
GCTTTCATAA ATCTCTTGAA GAAATTTAGA GGCTACGCCA CGACGTTGAT CACCCTCTAT
ATAAACTCGG AGAGGCCGAT ACCAGACGTG GTCAACCTTC TCAGGTCGGA GTGGTCTACT
GCTTCTAACA TCAAAGACAA GACCACCAGG ACCCATGTCC AGGACACACT AGAGCGTATA
ATAAACAACC TGAAGGGGGA GGCTAAGGCA CCTGAAAACG GCATGGCTAT TTTCGCGGGG
TTCCATATGA TAAATCAGGG AAATTACGAG TGGGTCTATT ACGTCGTCGT GCCTCCTCAG
CCGATCTACA CTTTTAAGTA CATATGCGAT ACGGCTTTCC ATACCGAGAT ACTGGAGGAC
CAGATACACG CCGGCGTTGT ATACGGTATT GTCGTCGTAG AGAGGGGGGA GGCTGTCATT
GCGCTTCTAA AGGGAGGGCA GTGGGAGGTT GTGAAGACTG TGGAGTTCTT CGTGCCGGGT
AAACACCACG CCGGCGGCCA GTCGGCGAAT CGCTTCAAGC GGCAGACGGA GCACTTGGCG
GAGACCTTCT ACAAGGTGCT GGCCGAGGAG GTGAACAAGA TCTTCCTCCA GATACCGACG
CTGAAGGGCA TAATAGTGGC AGGGCCAGGC CCCACCAAGG AGGACTTCCT AGAGGAGGGA
GGTCTCGACT ACAGGCTCAA GGACAAAGTT CTAGCGGTGG TGCCGGCTTG TTGCGCCAAC
GAATACGGCG TGATAGAGGC GATAAAAAAC GCCCAGGAGC AGCTCAAGGA GAGCGAATAT
GTCCACGCCA AGGAGGTCAT GGAAAAGGTG ATGTACTATG CAGTGAGAAA GAGCGACTAT
ATAGTATACG GCAAAGAGAG GGCGCTTAAA GCTCTAGAGA TGGGGATGGC AGAGGTTCTA
GTCGTGGCCG AGGAACTCGG CGAAGACGCA GTTCTAGAGG TGATCATGAA GGCGGAGGAG
AAGGGAGTTA AGGTAGAGGT TGTGCCAAAG GGCGTCGAGG AGTCTAAAAC GCTGATGCAA
GCCTTCGGCG GATACGTGGC GCTTCTCTCC ACTCCAGTGT GGGTATTGGA GCAACAGATC
CAGGCAGAGG CGGCGTAG
 
Protein sequence
MSFKRPPNGV YYIKTPVELR AFINLLKKFR GYATTLITLY INSERPIPDV VNLLRSEWST 
ASNIKDKTTR THVQDTLERI INNLKGEAKA PENGMAIFAG FHMINQGNYE WVYYVVVPPQ
PIYTFKYICD TAFHTEILED QIHAGVVYGI VVVERGEAVI ALLKGGQWEV VKTVEFFVPG
KHHAGGQSAN RFKRQTEHLA ETFYKVLAEE VNKIFLQIPT LKGIIVAGPG PTKEDFLEEG
GLDYRLKDKV LAVVPACCAN EYGVIEAIKN AQEQLKESEY VHAKEVMEKV MYYAVRKSDY
IVYGKERALK ALEMGMAEVL VVAEELGEDA VLEVIMKAEE KGVKVEVVPK GVEESKTLMQ
AFGGYVALLS TPVWVLEQQI QAEAA