Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pisl_0253 |
Symbol | |
ID | 4617397 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum islandicum DSM 4184 |
Kingdom | Archaea |
Replicon accession | NC_008701 |
Strand | + |
Start bp | 249720 |
End bp | 250142 |
Gene Length | 423 bp |
Protein Length | 140 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 639783333 |
Product | signal-transduction protein |
Protein accession | YP_929776 |
Protein GI | 119871769 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2905] Predicted signal-transduction protein containing cAMP-binding and CBS domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00276555 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 55 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGCGATA GAGTAAAATA TTACATCAAG CGAGAGCCTA TAACGGTCCC CCCTGGGACT ACTCTGAAAG AGGCCGTAGA GATTATGGCC CGGAACAATA TAGGTCTCGT AGTTATTGTC GACCAATCTA GGAGGCCTAT AGGCGTTTTG TCTGAACGTG ATGTAATAAG AGCTCTGGCA GCTGGGAAGT CCTTAAATAC CCCAGTAGAA GAGGTTGGGA CCATTGGAAA TTTACTTACT GTGAGAAAAG ACGACGATAT ATACACGGCG GTTAAAGCTA TGCGAAGCCG TGGAATACGC CACATAATTG TTGTTAACGA AGATGGCACT ATAGCCGGCG TGTTGTCAAT AAGAGACATC GTAGAAGACC GCGCGTTAAA AGCTATTGGC GATAAGATAT GGTGGCCTCC GCCAGAAGAG TAA
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Protein sequence | MGDRVKYYIK REPITVPPGT TLKEAVEIMA RNNIGLVVIV DQSRRPIGVL SERDVIRALA AGKSLNTPVE EVGTIGNLLT VRKDDDIYTA VKAMRSRGIR HIIVVNEDGT IAGVLSIRDI VEDRALKAIG DKIWWPPPEE
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