| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pisl_0197 |
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| Symbol | |
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| ID | 4618080 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum islandicum DSM 4184 |
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| Kingdom | Archaea |
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| Replicon accession | NC_008701 |
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| Strand | - |
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| Start bp | 186053 |
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| End bp | 187969 |
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| Gene Length | 1917 bp |
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| Protein Length | 638 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 639783279 |
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| Product | nickel-dependent hydrogenase, large subunit |
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| Protein accession | YP_929722 |
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| Protein GI | 119871715 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0374] Ni,Fe-hydrogenase I large subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 0.0283036 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTACGG TAAAGATCTG GATTGACCCC ATTACGCGTA TTGAGGGACA TCTAGCTTTG
TATGCAGAAA TAGATACCGG CACCAGAGCT GTGAAAACTG CTAGAACCAC AGTGATGGCA
TTCCGTGGCT TTGAGGTATT CCTAAGGGGT AGACCTCCCG AGGACGCCCC CCACATAGTT
TCTCGTACAT GTGGAGTCTG TGGCGCAGCT CATGCTAACG CCTCTGTGAT TGCCTGTGAT
ATCGCCGCAG GTATGACACC GTATCCAATG GGGAGTGTAT TGAGGACTCT TGCCTATTCC
ATGACAGACT ACATCTATGA CCACCCATTG ATTTTAAACA TGTTGGAGGG GCCGGACTAC
AGCGAGGTGA TTATAAGCAA GCTTACTCCA TCTGTGTGGA AGGTTGCCCA GGAAACGCCG
GCCAATTACA CGGCGATTCA CGGTTACCGC ACAATTGCTG ACATAATGAA AGATCTCAAC
CCTATCACAG GCAAAATTTG GCAATTAACG GTAAAATATC AAAGAATTGC GAGAGAAGCT
GGCGCATTAA TTTACGGCAG ACATGCCCAC CCATCTACCC TTATCCCCGG CGGAATCTCT
ACAGATATTA CTAACTTGCC CTCCCTGCTA CAGGAGTACT ACGCCAGACT TTCACAACTG
ACTGCCTGGG TTAAGTTCGT CTGGGCCGTC TGGCAAGACC TTTATGAGTT CTACCGTGAC
CACGTAACTA CGCCGGACGG GAAGCCCTAC GCCACTACCC AAGGCAAGAC CCACGACCCA
CCGGTGATGC TCGCCGGTGG TTTCGCAGAC GATCCCGAGG TATACAGCAA CATCACCGAC
GAGGCGAGGG GCAACTGGAG AGAGCTCTAT GCGAGGCTTG ACCAGGCCTA CAACGCGAGG
GGCGAGAAGC CGGGCTTTGC CATCGGCCAC GATATATACA GCAAGAACCC GACGGAGATC
CAGCTCGGCT ATGTGGAGTT TGCAGACTCC TCTTTCTATG AGGACTGGGT GAAGAGCAAC
GTGGCGCCGC CCACCGGCTG GATAAAGGAA GATCCCATCG GCCGGCCGTT GGTAAATGGA
ACAGAGCTCT TCAAGTACCA CATGTGGAAT AGGACCACTA TCCCGAAGCC TGGCGCCATT
AACTTCGCCG AGAAGTACAG CTGGGCGGCT GAGCCTAGGC TTGTGCTTAA GGACGGCCGC
ATCGCGCCTA TCGAGACCGG CCCCATATCG CAACTGTGGC TTGACACGCT ACACGCCACA
AAGTTTGAGC TAGCTGGCTT TAAGGCCTGG GAGTCCAACG GCAGTCAGAT GAAGATCTAT
CTCCCCGGCG GGACTGTGGC GCCTGACTTG CCGCCTGGCA CAAAGGACGA GCTTGTCATT
ACGTGGAATT TGCCCAAGTA CTCGACGACG TTTGAACGTC TGCTGGCCCG CGCGGTTCAC
CTCGCCGTGG TGAACGCCAT AGCCTGGGCC AACCTGCTGT ATGGCCTCCA GTTGGTAAAC
GCCGGGAAGG TGCAGACCTC TAGGCCGTGG AGCTACGGCA AGTGGCCCGA CTTTAGCTAT
AGCTTCGGCT GGTGGCAAGT GCCGCGCGGC AATTGTATGC ACTGGCTCGT GCAGAAGGGC
GGGAGGATCG TGAACTACCA GTACGAGGCT CCGACGACGC CCAACGTCAG CCCGTCTAAC
AACCGTTGTA CCGACCCGTG GAAGGGCCAG TGCGCCGGGC CGTTCGAAAT GTCTGTACGG
AACAGCGTAG TGACGGAGGA GCTCCCGCCT GACCAGTGGA CTGGCCTTGA CCAAGTGAGG
GCGATCAGGA GCTTCGACCC CTGTCTGGCG TGTGCTGTAC ATTTTGAGGC CAAGGGCGAA
GGGGGCAGAG TTATGAACGT AATCGAGAAG GTGATCTGGA ATGCTTGCGC CATTTAA
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| Protein sequence | MSTVKIWIDP ITRIEGHLAL YAEIDTGTRA VKTARTTVMA FRGFEVFLRG RPPEDAPHIV
SRTCGVCGAA HANASVIACD IAAGMTPYPM GSVLRTLAYS MTDYIYDHPL ILNMLEGPDY
SEVIISKLTP SVWKVAQETP ANYTAIHGYR TIADIMKDLN PITGKIWQLT VKYQRIAREA
GALIYGRHAH PSTLIPGGIS TDITNLPSLL QEYYARLSQL TAWVKFVWAV WQDLYEFYRD
HVTTPDGKPY ATTQGKTHDP PVMLAGGFAD DPEVYSNITD EARGNWRELY ARLDQAYNAR
GEKPGFAIGH DIYSKNPTEI QLGYVEFADS SFYEDWVKSN VAPPTGWIKE DPIGRPLVNG
TELFKYHMWN RTTIPKPGAI NFAEKYSWAA EPRLVLKDGR IAPIETGPIS QLWLDTLHAT
KFELAGFKAW ESNGSQMKIY LPGGTVAPDL PPGTKDELVI TWNLPKYSTT FERLLARAVH
LAVVNAIAWA NLLYGLQLVN AGKVQTSRPW SYGKWPDFSY SFGWWQVPRG NCMHWLVQKG
GRIVNYQYEA PTTPNVSPSN NRCTDPWKGQ CAGPFEMSVR NSVVTEELPP DQWTGLDQVR
AIRSFDPCLA CAVHFEAKGE GGRVMNVIEK VIWNACAI
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