Gene Pisl_0143 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_0143 
Symbol 
ID4616788 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp135701 
End bp136363 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content53% 
IMG OID639783226 
Productglutamine amidotransferase-like protein 
Protein accessionYP_929669 
Protein GI119871662 
COG category[R] General function prediction only 
COG ID[COG0121] Predicted glutamine amidotransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.199806 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones77 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGTAGAA TTCTTTTTTC CCTTGGAAAA CCCCCCAGAG ACATCCTCCT CGATTTTGTC 
CAAGTCTCCA GGAGAGACCG AACCATGGGC TGGAGCCACG GGTCGGGCTG GGGCGCGCTC
TGGACACGCC CAGGGTCCTA CGGACTATAT AAATCCATTA GGCCGATATG GGAAGACTAT
GTAGAGCCCC CAGACGGATA TATACTGTAT ATACTACACA GCAGGTTGGC ATCGGTAGGT
GAGCCGACGT TAGAGAACAC CCACCCCATC GTGAGGGGGA GATACGCCAT AGCTCACAAT
GGCACTATAG ACAGAGAGCG GTACAAAGCC GCCCTTAGAG AAGAAGGAGT TGAAGTGGGA
GAGCTAGACG GCTCCACAGA CAGCGAGCTT TTACTCAAGG CAATAATAGC GTTGGGCGGA
GACGAGACCG CAGTGAGGAA AGCCGCAAAG TTAGCAAAGC CCTACCTAGA CCCCCAGGAG
CCCGTCCTGA ACTTTGTCTT TGTAGACCTC GCAGGCTTAG CCATCTTCTA TACCTACAGA
GGGAGCGAAC ACCCCCACTT TGTGCCTGTG GAGAAAGACG GCATAATCGC CTCGGAGCCC
CTAGGCCAAC GCGAAGGCTG GAAGCCTCTA GAAAACGGGA AAACAGTAGT GGTAAAATTC
TAG
 
Protein sequence
MCRILFSLGK PPRDILLDFV QVSRRDRTMG WSHGSGWGAL WTRPGSYGLY KSIRPIWEDY 
VEPPDGYILY ILHSRLASVG EPTLENTHPI VRGRYAIAHN GTIDRERYKA ALREEGVEVG
ELDGSTDSEL LLKAIIALGG DETAVRKAAK LAKPYLDPQE PVLNFVFVDL AGLAIFYTYR
GSEHPHFVPV EKDGIIASEP LGQREGWKPL ENGKTVVVKF