Gene Pisl_0109 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_0109 
Symbol 
ID4617472 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp103167 
End bp104285 
Gene Length1119 bp 
Protein Length372 aa 
Translation table11 
GC content56% 
IMG OID639783191 
Productamidophosphoribosyltransferase 
Protein accessionYP_929635 
Protein GI119871628 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0034] Glutamine phosphoribosylpyrophosphate amidotransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.104123 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones72 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGGTGG GTCTCTTCGC GATATATAGC TTCGGGGGCC CCGTAGAGCT TTGGTCTATG 
GTATACTACG GCCTTAAGGC TTTGACAAAC CGCGGCGACT TCGCCGAGGC GTATGTATAC
AACGGCGGGG TGGAGAGGGT CGAAGTGGAC CTCTCTAGAG AGGTGGAAAG ATCTCTCCGC
GGCTCGGCGG CGGTCGGTTG CGTCTCGCCT AACGGCGGCT GTTGTAGAGA GGTAGAGGGC
GGCGTGAGGT GTTCAACCAA CGACGGGGGG ACATACGTCG AGTTGCGGAG AGACGGGGTT
GTGGCAGCTA GACGTGGCGA GTCTCTATGG CATCTAACCC TCGGCGCACA TGGGTTTGAC
TACGCCATAA TCTCCACAGA GAGCGCGGCA ATTGAGATCC TAGGCGGTGA GATCAGAAGG
TCGCTACGGC CGGGGGAAAT CATAGAGGTC AGCGAGTTGT ATCTAAGGTC AAGAGGCGGC
GGAGCCAGCG GCCCGCTCTG CGCCCTTGAG TTTATATATA TGGCAAGACC CGACAGCAGA
ATAGACGGCG TTGAGGTGGC TTCTGTCAGA GAGAAAATTG CTAAGAAGCT TGTAGAGAAG
ATAAGCTACA CACCAGACGT AGTTGTGGGC ATCCCAGAGA CGGGTTCATA TTACGCCGCC
CATATAGCTG CTGCCCTTGG GAGGCCCTAT CTGCCTGCCT TTGTCGCAAC GGCGAGGGGG
AGAAGCGCCT TGTTAGACGA AGTGAGAGAT AGGATGGCCG TCATACAGCT GAAGGCTAAC
GTCATAGAGT CAGCAGTGAG GGGGAAGAGG GTGCTCCTAG TAGACGACAG TATGATAAGT
GGCATCACCA TAAGGCTTGT GGCGCAGATG CTACGTCAGA AAGCCGGCGC CCTTGAGATA
TATGTGGCGG TAGTGGCGCC TCCGCTGAGG AGAACGTGTC CCCACGGCGT GAAAATGCCG
CCGGAGAGCC ACATGATCTA TAACGCCGTG CCGCCTGACG AAGTTAAATA CGCCTTGGAG
GTAGACGGCA TATTCTACCT ATCAGCCGAC GAGCTAGAAG AGACCTTGAA AGAGGCCGGG
GTCTCGGTCT GCACCCTCTG TATGAGGCCG AGACGATGA
 
Protein sequence
MSVGLFAIYS FGGPVELWSM VYYGLKALTN RGDFAEAYVY NGGVERVEVD LSREVERSLR 
GSAAVGCVSP NGGCCREVEG GVRCSTNDGG TYVELRRDGV VAARRGESLW HLTLGAHGFD
YAIISTESAA IEILGGEIRR SLRPGEIIEV SELYLRSRGG GASGPLCALE FIYMARPDSR
IDGVEVASVR EKIAKKLVEK ISYTPDVVVG IPETGSYYAA HIAAALGRPY LPAFVATARG
RSALLDEVRD RMAVIQLKAN VIESAVRGKR VLLVDDSMIS GITIRLVAQM LRQKAGALEI
YVAVVAPPLR RTCPHGVKMP PESHMIYNAV PPDEVKYALE VDGIFYLSAD ELEETLKEAG
VSVCTLCMRP RR