Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pisl_0020 |
Symbol | |
ID | 4616576 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum islandicum DSM 4184 |
Kingdom | Archaea |
Replicon accession | NC_008701 |
Strand | + |
Start bp | 17273 |
End bp | 18145 |
Gene Length | 873 bp |
Protein Length | 290 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 639783101 |
Product | hypothetical protein |
Protein accession | YP_929547 |
Protein GI | 119871540 |
COG category | [S] Function unknown |
COG ID | [COG2512] Uncharacterized membrane-associated protein/domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 69 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGGTGA TATTAAACCT CACCGCGCCT CCAGTCCTCA TACTCCTCCT CCCAGCCGCC ATGTTTGGAA ACTACACGCT TCCCGCGCCT CCCGCCTCCG ACGTGGCGGC CTTTACGCCG AGCGGCGCCG CCTTGCCCAC CTGGGTAGTC GGCGGCAACC TGTATATACT ACAGGGAGGA GACCCCGCCG TAGCTATATA CGTCCCCCGG TTTGAAAACT CCAGTGGTGT GTATAAAGTA AGCCTAGGCA GGGGCGACAT CATAATCCAA GCGCCTCCCG GGGTAATGAT ACAAGACGTA AACCCCCTGC CTAGACAGAC GAAGCTGAAC AAGACAGGCC TATATCTCTA CCTCACAGGC CCCGCCACAG TCACGTACTA CTTCTTCAAG GTAGAGATAA AGCCGCCCCC AACCCCGCCG CCTCCGACAA CTCCAGCCAC GCCAACGGCT ACAACTCCTC CTGTAACTAC GCCACCTGCC ACAACGCCCC CGGCGACCAC GCCTACGCCT CAGCCTACGC CGACTGCTAC AGCAACTCCC ACGCCGCCTT CTGGCGCCGG GGCGCAGGTG CCTATGTGGC TTGTTGGCGT GGCTGTTGTG GCGGTGGCGG CTGTGGCGGT TGTGGCTTAT CTGTTGACTA GGAGGGGGGG CGGCGGGGGC GACTGCGGCG ATTTACACGA GACGGATATA GCCATCCTCA AGGAGCTTGA GAAGAGGGGC GGCTCTGCCG AGAGGGGGGA GCTCCAGGAG GCTCTCGGCC TTCCGAAGAC CACCCTCCAC AGGCACCTCC ACAAGCTCTC CAAATACGGC TTCGTGAGGC TGGTGCAGTT GGGCGGGTCC CAGAGGGTTG AGCTGGTTAG GGGCTGTAGG TGA
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Protein sequence | MLVILNLTAP PVLILLLPAA MFGNYTLPAP PASDVAAFTP SGAALPTWVV GGNLYILQGG DPAVAIYVPR FENSSGVYKV SLGRGDIIIQ APPGVMIQDV NPLPRQTKLN KTGLYLYLTG PATVTYYFFK VEIKPPPTPP PPTTPATPTA TTPPVTTPPA TTPPATTPTP QPTPTATATP TPPSGAGAQV PMWLVGVAVV AVAAVAVVAY LLTRRGGGGG DCGDLHETDI AILKELEKRG GSAERGELQE ALGLPKTTLH RHLHKLSKYG FVRLVQLGGS QRVELVRGCR
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