| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_3607 |
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| Symbol | |
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| ID | 4605854 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 4245135 |
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| End bp | 4246106 |
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| Gene Length | 972 bp |
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| Protein Length | 323 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 639783028 |
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| Product | formate dehydrogenase, C subunit, putative |
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| Protein accession | YP_929479 |
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| Protein GI | 119776739 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2864] Cytochrome b subunit of formate dehydrogenase |
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| TIGRFAM ID | [TIGR01583] formate dehydrogenase, gamma subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.394168 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAACAATT GGTTCAAAAT CCTGGCCGTG GCTGTGCTAC TCATGCTGGG GATGGGGCTT
GGCCATGCGG CCGACGCCAA CGCCCAACTG GGGGATGCCC AGATGTGGGC CGAGCTGAAA
GATGGCGCTG TGGGTTACAC CACCTCGACC AGTGAGTTTC ATGGTCAGCC TATCAATACC
TACGATCCCA GACTGCTGGA GGCGCGCGGC ACCTGGTTGG CGCCGGGGCT GATGGCGGCA
CTGTTTGGCA TGATAGTGGT GTTTGCCCTG TTCATCATGG TCAATGGTAT CTCCAGGTTG
CACCATGGTT TTTCGGGCAA GATGGTGTAT CGCTGGTCCA AGCTGGATGT AAGCATTCAC
TGGCTGGGCG CCATTCCCTG CTTGCTGCTG ATCCTCACAG GTTTGGTACT GCTGGCAGGC
CGCTTCTTCT TCCAACCCTG GCTGGGTGAA GGCGTGTGGG CCGGTCTGGT GTATGCTGCC
AAGCAGGTGC ACGATGTCAT GGCCATTCCA TTTATGATTG GCTGGGCACT GATGACCCTG
ATGTGGGCCA AAAATCAGCT GCCGAAAATG TACGACATCA AGTGGTTTAT GGTGGTGGGT
GGCTATATCA ACTTTGGCCC CTTCAAGAAT CAGCATCCCG ATGCCGGCTT TGCCAACGCC
GGTGAGAAGA TGTGGTTCTG GACCTTTGCC CTGTTCGGGC TGGTGATCTC TGCTTCCGGT
ATGTTGTTGC TGTTCCCTAA TCTGTTCGAG CCAAGCCGCA CCCTTAGCCT GACCGCGCTG
ATCCTGCACG GCATCAGCGC CATCATTATT TGTGCCTTCT CCATAGTGCA CATCTTTATG
GCGACCGTGA TGTCTGAGGG CGGTATGGAG TGTATGGTGT CGGGCTACTG TGATGAGAAC
TGGGCTACGC AGCATCACAA CCTGTGGTTT GATGAAATCA AAGCTAACGG TACTTTGAAG
TATAAGGACT AA
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| Protein sequence | MNNWFKILAV AVLLMLGMGL GHAADANAQL GDAQMWAELK DGAVGYTTST SEFHGQPINT
YDPRLLEARG TWLAPGLMAA LFGMIVVFAL FIMVNGISRL HHGFSGKMVY RWSKLDVSIH
WLGAIPCLLL ILTGLVLLAG RFFFQPWLGE GVWAGLVYAA KQVHDVMAIP FMIGWALMTL
MWAKNQLPKM YDIKWFMVVG GYINFGPFKN QHPDAGFANA GEKMWFWTFA LFGLVISASG
MLLLFPNLFE PSRTLSLTAL ILHGISAIII CAFSIVHIFM ATVMSEGGME CMVSGYCDEN
WATQHHNLWF DEIKANGTLK YKD
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