Gene Sama_3592 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_3592 
Symbol 
ID4605839 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp4223925 
End bp4224677 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content57% 
IMG OID639783013 
Producthypothetical protein 
Protein accessionYP_929464 
Protein GI119776724 
COG category[R] General function prediction only 
COG ID[COG3907] PAP2 (acid phosphatase) superfamily protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCCGGA TTCACTTTGA TATCAGTCCA CGCCATTGGT GGCTTCGCCA TTTGCACATC 
CCCTTATTAC TGGGGCTGGC GTTTTTGGTG TTGGCGACCC ATTGGGACTG GGATATTTCT
GTGTCTTCAG CACTTTTCCG CCTGGAAGGC GGCGTGCATT CCTGGCCGCT GAGGTATTGG
TGGTTAACCG AGAAGGTGCT GCATACCGGC GGGCGGGATT TGGTGCTACT GGCATCGTTA
TTGTTACTGG CGTTGACGGT AACCGCCGCG CTGAGCAAGC GTTTTAAGCC GTATCTGCGT
GGATTTCTGT ATCTCTTGTG CTCAGTGGCA CTCAGCGTGC TGCTGGTGCG TTGGGGCAAG
TCGCTGACTC AGGTGAATTG CCCCTGGGAT TTAACCTTGT TCGGTGGCAA GTATCCCCAT
GTGCCTTTTC CGGCGAGCAT GGAAGGTCCG GGCTTTGGGG GGCAATGCTT CCCCGGTGGC
CATTCCAGTG GCGCCTTTGC CTGGGTCGCA CTCTACTACT TTGCCATGGC TTACTTCCCC
CGTTGGCGCT GGCGAGTGCT CGCCTCAGTG CTGGCAGTCG GGGCCGTGTT TGCCCTGACT
CAGGAGCTTC GTGGTGCGCA CTTTTTAACC CACGACATTA CCAGTCTGTT GTTATCCTGG
TTGGTGGCCA CCCTGCTTTA TCCACTGTTT TGGCGCCATG GTTTTAAGGC TGACACTGGC
ATCCCGGCTA ACGCAGTCGC CAAACCAGAC TGA
 
Protein sequence
MPRIHFDISP RHWWLRHLHI PLLLGLAFLV LATHWDWDIS VSSALFRLEG GVHSWPLRYW 
WLTEKVLHTG GRDLVLLASL LLLALTVTAA LSKRFKPYLR GFLYLLCSVA LSVLLVRWGK
SLTQVNCPWD LTLFGGKYPH VPFPASMEGP GFGGQCFPGG HSSGAFAWVA LYYFAMAYFP
RWRWRVLASV LAVGAVFALT QELRGAHFLT HDITSLLLSW LVATLLYPLF WRHGFKADTG
IPANAVAKPD