Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_3592 |
Symbol | |
ID | 4605839 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | - |
Start bp | 4223925 |
End bp | 4224677 |
Gene Length | 753 bp |
Protein Length | 250 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 639783013 |
Product | hypothetical protein |
Protein accession | YP_929464 |
Protein GI | 119776724 |
COG category | [R] General function prediction only |
COG ID | [COG3907] PAP2 (acid phosphatase) superfamily protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCCCGGA TTCACTTTGA TATCAGTCCA CGCCATTGGT GGCTTCGCCA TTTGCACATC CCCTTATTAC TGGGGCTGGC GTTTTTGGTG TTGGCGACCC ATTGGGACTG GGATATTTCT GTGTCTTCAG CACTTTTCCG CCTGGAAGGC GGCGTGCATT CCTGGCCGCT GAGGTATTGG TGGTTAACCG AGAAGGTGCT GCATACCGGC GGGCGGGATT TGGTGCTACT GGCATCGTTA TTGTTACTGG CGTTGACGGT AACCGCCGCG CTGAGCAAGC GTTTTAAGCC GTATCTGCGT GGATTTCTGT ATCTCTTGTG CTCAGTGGCA CTCAGCGTGC TGCTGGTGCG TTGGGGCAAG TCGCTGACTC AGGTGAATTG CCCCTGGGAT TTAACCTTGT TCGGTGGCAA GTATCCCCAT GTGCCTTTTC CGGCGAGCAT GGAAGGTCCG GGCTTTGGGG GGCAATGCTT CCCCGGTGGC CATTCCAGTG GCGCCTTTGC CTGGGTCGCA CTCTACTACT TTGCCATGGC TTACTTCCCC CGTTGGCGCT GGCGAGTGCT CGCCTCAGTG CTGGCAGTCG GGGCCGTGTT TGCCCTGACT CAGGAGCTTC GTGGTGCGCA CTTTTTAACC CACGACATTA CCAGTCTGTT GTTATCCTGG TTGGTGGCCA CCCTGCTTTA TCCACTGTTT TGGCGCCATG GTTTTAAGGC TGACACTGGC ATCCCGGCTA ACGCAGTCGC CAAACCAGAC TGA
|
Protein sequence | MPRIHFDISP RHWWLRHLHI PLLLGLAFLV LATHWDWDIS VSSALFRLEG GVHSWPLRYW WLTEKVLHTG GRDLVLLASL LLLALTVTAA LSKRFKPYLR GFLYLLCSVA LSVLLVRWGK SLTQVNCPWD LTLFGGKYPH VPFPASMEGP GFGGQCFPGG HSSGAFAWVA LYYFAMAYFP RWRWRVLASV LAVGAVFALT QELRGAHFLT HDITSLLLSW LVATLLYPLF WRHGFKADTG IPANAVAKPD
|
| |