Gene Sama_3544 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_3544 
Symbol 
ID4605791 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp4176165 
End bp4176770 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content58% 
IMG OID639782965 
Producthypothetical protein 
Protein accessionYP_929416 
Protein GI119776676 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCACCTC TCAACCGCCT TTCATTTTGG TTTATGCCAT GGCTGCTGGT CACCTTATGG 
GTGGGCGCGC CTTCAACCCT GCTTGCCCGC CACGTCGTGG ACGAAGGCGC CAGCGAATAT
GAATCCCTTA TCAAGGCCAC ACCAGCGGCG CCGGAAGAGT CTGTACCGGG TCAGTCTGCT
GCCGACACTC AGGTGCTGAA TAATCAAAGC TTGCTCAGGC CGCGCCAACA GAGCAGAGAA
ACGGCCCTCG ACAGTGAAGG GCGTCCGCTT GCCATACCCA CAGAGGTCAA GCCTGCCATG
GAATTTGGGC CCGAATCCCG TGACTGGCAG TGGGAAGGTA GCAGGGATAA ACCGGTTTCC
ACAGACAAAC GCAGCAAGGT ATCCAAAACG TCATCGGACA AAGGTCGTGG TAAGGTTGCC
AACGATCCTA ACTGCCGCTG GCTGGATACC CGGATTTCGC AGCTGGAAGA CTTACTTGCT
TCCAGTGGCG GCGGTGCCCA CCATCAGGAT GAACTGAAGG CGAGAATGGG AGAGTGGCGT
TGCCTCAAGT GCGGCGCCGA CGGCCCAAAG CAAGGTGACC ACTCGCGCTG CCAATACCGC
CGCTGA
 
Protein sequence
MSPLNRLSFW FMPWLLVTLW VGAPSTLLAR HVVDEGASEY ESLIKATPAA PEESVPGQSA 
ADTQVLNNQS LLRPRQQSRE TALDSEGRPL AIPTEVKPAM EFGPESRDWQ WEGSRDKPVS
TDKRSKVSKT SSDKGRGKVA NDPNCRWLDT RISQLEDLLA SSGGGAHHQD ELKARMGEWR
CLKCGADGPK QGDHSRCQYR R