Gene Sama_3519 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_3519 
Symbol 
ID4605766 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp4153209 
End bp4153766 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content58% 
IMG OID639782940 
Productacetyltransferase including N-acetylase of ribosomal protein 
Protein accessionYP_929391 
Protein GI119776651 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1670] Acetyltransferases, including N-acetylases of ribosomal proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.420967 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCTCCG AACTCTGCCT TGCCCTGACC CCAAGATTGG GATTACGCCG CTTTACTGCA 
GACGATGCGA CTGATTTTTA CAACCTGAAC AGGGATGCAG AGGTACTCAA ATATACGGGG
GATCTGCCTT TTGAGAACGC CATTGCTGCC CGGGATTTTA TCCTGGGGTA TCAGCATTAC
CGCGACCATG GATTTGGCCG CTGGGCCATA CAGCTTCATT CGGGTGAGTT CATCGGTTTC
TGTGGTTTGA GGCAGCACGG GGACGCCAGT GTCGACCTGG GATTCAGGTT AATGCGCGAT
TATTGGGGCC AAGGCCTGGC CGCCGAAGCG GCCAGAGCCG CCATGGTGCT GGCAATCGAT
AAATATGGCC TGACTGAGCT GATTGCCCGC GCCATGGCGG GTAATGGCGC CAGCATCGCC
CTGCTGGGCA AACTCGGATT CACGCCAAAG GCCGGGTTGG ATACTCCACC CTGGCTGGGC
TTTGCCGCCA ATCTAACCCA GGGAGCCCTG GTGGATGACT TGGCTCTGTG GCGCACCGCT
GTTACTCTTT CGCCCTAG
 
Protein sequence
MPSELCLALT PRLGLRRFTA DDATDFYNLN RDAEVLKYTG DLPFENAIAA RDFILGYQHY 
RDHGFGRWAI QLHSGEFIGF CGLRQHGDAS VDLGFRLMRD YWGQGLAAEA ARAAMVLAID
KYGLTELIAR AMAGNGASIA LLGKLGFTPK AGLDTPPWLG FAANLTQGAL VDDLALWRTA
VTLSP