| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_3518 |
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| Symbol | |
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| ID | 4605765 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 4152140 |
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| End bp | 4153018 |
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| Gene Length | 879 bp |
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| Protein Length | 292 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 639782939 |
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| Product | carbohydrate kinase |
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| Protein accession | YP_929390 |
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| Protein GI | 119776650 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0524] Sugar kinases, ribokinase family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCAATG TTTTACTGGT AGCCAACCTC AATTGTGACC GCATCTTGTT GCTGGATAAA
CCACTCACCA GCGGCGGGCG TTTTCATTAC CACGATGGGG GCCAACGCCT GGGAGGCGGC
GGCGCCAACA CGGGGCTGGG GCTGGTATGG GCCGGGCACA GGGTAGCTCT GGTCAGCCAG
GTCGGCAGAG ATAAGGTGGG CGACTGGCTG CTCGCCGAAA CCAGCACTGC CGGTATTGAT
TGCCACCTCA TTTCGCGCCG CCCCGGCAAT ACCTGCGAGA TGTTACTGAT GATGACCCCT
AACGGCGACC GAACCATCAT GCGGCCCCAA AGGCCCATCT TTGAGTTGCC GGTGCCGCCC
CGCTGGCAGC GCTGGGACGT GCTCTATATC AACTCGTCTG CCGAAGGCGC CGTCAGCTGG
GCCAAAACAG CGCTGGAACA TTGTCTGGTG GTTGGACAAT TGGCGAAAGA CGAACGTCAG
CGCCCCTGTC ATATCCTGAT TACCTCGGCA TCGGATCTCG CTGGCAGAGC CTCGGGTGAC
CTGTGGCAGT ATGCCAAAGG CATTGCCGGT GACAGCCTGC AGCATTTTAT CGTGACCGAT
GGCCCCAAAG GGGCGAAGGC CTACAGCGAA ACCGGGACTC TGCATGTTCC GGCCAGACCT
GCAAACGTGG TGGATACCAC AGGGGCTGGT GATGTGTATG CCGCTGGGCT GATCCATGGT
TTGGTCTCGG GTCTTGCGCT GCAGCAAGCC ATGGAAGAAG CCGCCATTTG GGCAGCAATA
GCAGTGGAAA GTGAAAGCTC TACCCCCGGT GAAGCACTTA AAGATCATTT GGCGGAAAAA
GAGGCTGAAT GTCATACAAC TGCAACCAAG TCCCTCTAG
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| Protein sequence | MANVLLVANL NCDRILLLDK PLTSGGRFHY HDGGQRLGGG GANTGLGLVW AGHRVALVSQ
VGRDKVGDWL LAETSTAGID CHLISRRPGN TCEMLLMMTP NGDRTIMRPQ RPIFELPVPP
RWQRWDVLYI NSSAEGAVSW AKTALEHCLV VGQLAKDERQ RPCHILITSA SDLAGRASGD
LWQYAKGIAG DSLQHFIVTD GPKGAKAYSE TGTLHVPARP ANVVDTTGAG DVYAAGLIHG
LVSGLALQQA MEEAAIWAAI AVESESSTPG EALKDHLAEK EAECHTTATK SL
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