Gene Sama_3515 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_3515 
Symbol 
ID4605762 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp4150159 
End bp4150623 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content49% 
IMG OID639782936 
Producthypothetical protein 
Protein accessionYP_929387 
Protein GI119776647 
COG category[S] Function unknown 
COG ID[COG4538] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTATTCC TGTTGGTTGT TAAAGCAGCA ATAACGCCCA TGACAAGCGG GATAGCGCCA 
TATGCGCAAC GACTTATTTA CTCAGAAAAA GGAATCAAAA TGACACCGGA GCAATTGGTG
CAAGGGCAGC TGGACGCCTA TAACGCCCAT GACCTGGACG CCTTTTTACG CTTTTTCAGT
GACAAGGTGG CAGTTATCCG CCCGCCCGCA TCCAAGCCTG TATTGCAGGG CAAGACCGAA
TTTACCGAGT TTTATCGAAA GGAACGCTTT TGTGTGCCCA CACTCCATGC CGAAGTCAGC
AATCGCATGG TGCTGGGAAA TAAAGTGATA GACCATGAGC ACATCACAGG CTTGGGCCCC
GATGCATTTG AAGTGGCTGT GGTGTATGAA ATTCAAGACG GTCTTATCCA AACTCTGTGG
AGTTTTGGCG CAGACAAAAT TCAGGGAATA CCCAGTCATG ACTGA
 
Protein sequence
MLFLLVVKAA ITPMTSGIAP YAQRLIYSEK GIKMTPEQLV QGQLDAYNAH DLDAFLRFFS 
DKVAVIRPPA SKPVLQGKTE FTEFYRKERF CVPTLHAEVS NRMVLGNKVI DHEHITGLGP
DAFEVAVVYE IQDGLIQTLW SFGADKIQGI PSHD