| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_3505 |
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| Symbol | |
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| ID | 4605752 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 4138394 |
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| End bp | 4139176 |
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| Gene Length | 783 bp |
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| Protein Length | 260 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 639782926 |
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| Product | bioH protein |
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| Protein accession | YP_929377 |
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| Protein GI | 119776637 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
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| TIGRFAM ID | [TIGR01738] putative pimeloyl-BioC--CoA transferase BioH |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACACAAG GTTCACAGGC ACATATCCAT ATCGACACCC ATGGCACAGG CAAAAACCTG
GTGATTCTCC ACGGCTGGGG CATGAACGCG GCTGTGTTCA CGCCCCTTAT GGGTGCCTTT
CCCGAGTATA GGCTGCACTG CCCCGACCTG CCGGGATTCG GCCATAGCAC TATGTCTGGT
GATACCCTGG ATGATTGGGT CGACACCCTG ATGTTGGCGC TGCCCGAGCA GATGGTGCTT
GCGGGTTGGT CACTTGGTGG CTTGGTGGCG ACCAGAGCTG CACTGCGCTA CCCCCAGCGG
GTTGAGGCGC TGATAACCAT TGCCTCATCC CCTTGTTTTA TGGCGCGGGA GGAAGAAAAC
TGGCCCGGCA TTCCACCCCA GGTATTGTCG CAATTTGGCG CAGAACTGGG CAAAGATCTG
CCCAAAACCA TAGAGCGTTT TCTCGCTATC CAGGCCATGG GCAGCGAAAC AGCGAGGGAA
GACATCAAGC GCCTGCGGGA TTTGGTGCTG TCACGCCCCC TGCCCCAGCC AGCGGCGTTG
GATCAGGGGC TGAACATGTT AAAAGACGTG GATTTACGCC CCGAGCTGGC AAACCTGAGC
CAACCCTGGT TGAGAGTGTG GGGACGCCTC GATGGGCTGG TTCCCAAGCG GGTCATGCCG
GCCATGCCAA GCCCTGCCGG TACCTGCGAG GACCTGATGC TCGCCAAAGC ATCCCATGCC
CCTTTCTTTT CTCACCCCAC TGAATTTGTG ACCGGGGTGA AAGACTGGCT CTTCAGGCTT
TAA
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| Protein sequence | MTQGSQAHIH IDTHGTGKNL VILHGWGMNA AVFTPLMGAF PEYRLHCPDL PGFGHSTMSG
DTLDDWVDTL MLALPEQMVL AGWSLGGLVA TRAALRYPQR VEALITIASS PCFMAREEEN
WPGIPPQVLS QFGAELGKDL PKTIERFLAI QAMGSETARE DIKRLRDLVL SRPLPQPAAL
DQGLNMLKDV DLRPELANLS QPWLRVWGRL DGLVPKRVMP AMPSPAGTCE DLMLAKASHA
PFFSHPTEFV TGVKDWLFRL
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