Gene Sama_3478 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_3478 
Symbol 
ID4605725 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp4109170 
End bp4109595 
Gene Length426 bp 
Protein Length141 aa 
Translation table11 
GC content51% 
IMG OID639782898 
Productputative hemoglobin 
Protein accessionYP_929350 
Protein GI119776610 
COG category[C] Energy production and conversion 
COG ID[COG1017] Hemoglobin-like flavoprotein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.540867 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCACTGA CCAACGACCA AATATCACTC ATCAACCAGT CTTTCGGCCT GGTTCGCCCC 
ATTGCCGATG ACGCAGCGGC ACTTTTCTAT CGCAACCTGT TCGAAATAGA CCCATCACTG
CGGTCATTAT TTAAATCCGA TCTCAAGATT CAGGGACGCA AGCTGATGGC GATGTTGGAT
GCCGCAGTAA AGGGACTGAA TAACCCGGAT AAGTTAGTCC CTGTCTTGCA GGACCTGGCC
CGGCGGCATG TGCAATACGG AGTGAAAACC CATCATTTTT CTCCCGTGGG CAACGCACTG
CTGTATACCC TGGCCGAAGG CTTGGGTGAC AAGTTTACCA AAGAAGTGAA AGACGCCTGG
ATAGCGGTAT TACATTTGGT CGCAGATGTG ATGAAGGCGG AGATGAAAAA GCAGGGCTGT
GCCTAG
 
Protein sequence
MSLTNDQISL INQSFGLVRP IADDAAALFY RNLFEIDPSL RSLFKSDLKI QGRKLMAMLD 
AAVKGLNNPD KLVPVLQDLA RRHVQYGVKT HHFSPVGNAL LYTLAEGLGD KFTKEVKDAW
IAVLHLVADV MKAEMKKQGC A