Gene Sama_3473 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_3473 
Symbol 
ID4605720 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp4102098 
End bp4102448 
Gene Length351 bp 
Protein Length116 aa 
Translation table11 
GC content59% 
IMG OID639782893 
Producthypothetical protein 
Protein accessionYP_929345 
Protein GI119776605 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.92853 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.888619 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACAC TGATTGGCCT GTTTTTGGCC GCCCTTTTAT CTGTCACTCT GTCCGTTGAC 
GCCCAGGCGA CACCTGCCCA TGAGCATCAC GCCCACCAGG CAACCGCCGC CGAAGCAAGC
CATGCCTGCC CCATGCATCC TGACGTTACC GGTAAAGCCG GCGACAGCTG CCCCAAGTGC
GGCATGGACT TGGAAGCAAA GCATACCCAC GCCTGCCCTA TGCATCCGAA AGTAACCGGT
GCTGCCGGTG ATTCCTGCCC AGACTGCGGC ATGGATCTCG AGCCGGTTGC CGCCAAGGGC
GAGCACTGCG CCAACTGTCC TAAAAAAGCC ATGAACCATC AGCATCACTG A
 
Protein sequence
MKTLIGLFLA ALLSVTLSVD AQATPAHEHH AHQATAAEAS HACPMHPDVT GKAGDSCPKC 
GMDLEAKHTH ACPMHPKVTG AAGDSCPDCG MDLEPVAAKG EHCANCPKKA MNHQHH