| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_3451 |
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| Symbol | |
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| ID | 4605698 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 4081288 |
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| End bp | 4082715 |
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| Gene Length | 1428 bp |
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| Protein Length | 475 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 639782871 |
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| Product | hypothetical protein |
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| Protein accession | YP_929323 |
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| Protein GI | 119776583 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0790] FOG: TPR repeat, SEL1 subfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGGCA AGGGACTGAC AGATACCGCG ATGATAGCGG CCTTCGATGC CGGCCTTGCC
GAGGAATATC GCCGCGCCAG ACGCTTTGCC AAAGATGTTC CTGCCCAGGC GCTGCTGACA
CTGCGCAGCG CCCTCTACAA GCTCACAGGT ATTCTGGCCG CTGGCCGCCT GACCTTCGAC
AGCCCCAATC TTTACAACCG CATCGAGTCC TTGTCGCAGG CGCGTTTGCT GGGGGTACGT
CAGGCTCGCG CCATGCACAG GCTCAGGGCC GACGGTAACC GTGGTGCCCA TCCGGAAAAA
TATCATCTCG ATGAGGCGTC ACTGCTTGCA CTGGCAAACA AGGCGCTGCT GAATTTTTGT
CAGCTGGTGT CCGAGTTGTC GGGCAAGGGG GCGGATACAG CCCACTTCGA ATTTGAGCCT
CTTGATGATC TCAGTAACAG AGAACTCTGC TACAGGGCCG TGATGGCGGA TGATGCCGAG
GCACAGTATC TGCTGGGGAT GGCCTTTAAA ACCCAGGGCT TACTGGCACG GGATGCGCAG
CAAGGCTTGG TTGATGAGCC CACAACGTCA GCGGTGCTGG CGAAGGCGCA ATATTGGTTT
GCCCAGGCGG CAAGCAGCCT TGCTGTGGCC CGCTATGAAT TGGGTGTGGC GTTTCTCCAT
GCATATCAGG GACCAGCAGA TGAGGCCAAA GGTATTTCCC TGATTGCCGA TGCTGCCACT
CAAGGGGTGG AAGATGCCAA GGCCTTGCTG GGATACTTTG CCCTGACGGG GCAGGGTATG
GTCGTGGATC TGCCGAGGGC CGAGTCTCTG CTGACCGAGG CCACACAAGC CGGCCATACC
GAGGCCGAAG CTAACCTTGG GGTACTCAGG TACCAGCAGG GGCGCCTCGA AGAAGCATAC
CGGCATATCG AATCGGCGGC GCGGGGTGGT TTCCCACAGG CGCAGTATCA TGTGTCCCTG
ATGTTGAGTC GGGGTGAAGG CTGCCGGATT GACCCCCTTG GTGCCGAGCG CTGGCTTGCT
GAGGCCGCCG AGCAAGGGCA GCTTGATGCC ATGTTGCTGC GTGCCCGGCA TATGCTCCAT
GATGAAGCCA CCCTTGGCAG TGATTTAACC CTCGCCGAAG ATTATCTGCG TAAAGTCATC
CGATTCAGTC GGAATGTGCC CGCCATGCTG GAGCTGTCTA TGGCCCTGGC CGATGGCATT
CTCGGACGCA TCGATGTGGT GGAGGCGGCA GCCCTGCTCG GTGAGGCTGC ACGGCTTGCC
AGTGATGAAG AGCTCGCCAT CATTACGCCG CTGTGGCAAT CCCTGGCGAC CCAGATTGAA
AATGTGCTGC CGCTTTCTGT TAATGCAGAC GAAAAAAAGG CCCTGGAGAG AGCCAAAGAA
CTGCTGTTGG AGATGCCGGG GCAGGGTGAG AGTGCCCCGG AGCAGTGA
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| Protein sequence | MAGKGLTDTA MIAAFDAGLA EEYRRARRFA KDVPAQALLT LRSALYKLTG ILAAGRLTFD
SPNLYNRIES LSQARLLGVR QARAMHRLRA DGNRGAHPEK YHLDEASLLA LANKALLNFC
QLVSELSGKG ADTAHFEFEP LDDLSNRELC YRAVMADDAE AQYLLGMAFK TQGLLARDAQ
QGLVDEPTTS AVLAKAQYWF AQAASSLAVA RYELGVAFLH AYQGPADEAK GISLIADAAT
QGVEDAKALL GYFALTGQGM VVDLPRAESL LTEATQAGHT EAEANLGVLR YQQGRLEEAY
RHIESAARGG FPQAQYHVSL MLSRGEGCRI DPLGAERWLA EAAEQGQLDA MLLRARHMLH
DEATLGSDLT LAEDYLRKVI RFSRNVPAML ELSMALADGI LGRIDVVEAA ALLGEAARLA
SDEELAIITP LWQSLATQIE NVLPLSVNAD EKKALERAKE LLLEMPGQGE SAPEQ
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