| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_3429 |
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| Symbol | |
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| ID | 4605676 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 4059339 |
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| End bp | 4059908 |
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| Gene Length | 570 bp |
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| Protein Length | 189 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 639782849 |
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| Product | outer membrane protein, putative |
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| Protein accession | YP_929301 |
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| Protein GI | 119776561 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3637] Opacity protein and related surface antigens |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.382375 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.359463 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAACAAAA TGAAACTGGC GGCCCTGGCC GCACTCATCG CCAGCACAGG TGCCATGGCG
GAAACCGATA ACACCGGCTT TTACGTGGGG GGTGCCATCA ATCAGGTGAA AGCCTCCGGT
GACGGTGAAG GCTCGTCCGA TGGCGTAGGT TTTGGTGCTT ACGGCGGCTA CAACTTCAAC
GAATGGTTTG GTTTGGAAGC CAACCTGTTT GCCAGTGGCG ATTTGGGAGA GGACGGCGTG
GATGTCGGTG CGGGCGCCCT GACCTTTACC CCAAAATTTA CTTACCACTT CAATGATACC
TTCTCTGCCT TTGCCAAAGT GGGTGTGGCT TCCATGGCCG TGGTGGTGGA CTATGGCCCA
TTCGATGCCG ATTACACCGG CTGGGGCCTA ACCTGGGGTG TAGGCGTTAA CGCTGCGCTG
ACCGAAAAAC TGAACCTGCG CCTGAGCTAC GATGAAACCC GTGGCGATTT GGATGAAGAT
GGTTTTTGGT TCGACAACGA TTACTACAAT GGTGAAATCG ACAACGTGAA GATTTCCCAG
ATCTCTTTGG GACTGCACTA CCAGTTCTGA
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| Protein sequence | MNKMKLAALA ALIASTGAMA ETDNTGFYVG GAINQVKASG DGEGSSDGVG FGAYGGYNFN
EWFGLEANLF ASGDLGEDGV DVGAGALTFT PKFTYHFNDT FSAFAKVGVA SMAVVVDYGP
FDADYTGWGL TWGVGVNAAL TEKLNLRLSY DETRGDLDED GFWFDNDYYN GEIDNVKISQ
ISLGLHYQF
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