| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_3428 |
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| Symbol | |
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| ID | 4605675 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 4058538 |
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| End bp | 4059083 |
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| Gene Length | 546 bp |
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| Protein Length | 181 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 639782848 |
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| Product | outer membrane protein, putative |
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| Protein accession | YP_929300 |
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| Protein GI | 119776560 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3637] Opacity protein and related surface antigens |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.206004 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACTCA AGTGTCTTTT GGCTTCAGCC CTGATGCTGT GTGCCGTTTC GCCTGTTTTT
GCCGCCAAAG ATCTCGGTTT TTACGCCGGT GGCTACGTCA GCAACACCAA TCTCGATGAT
AAAATTGGCC CCTTCGATGA GTCGGCCTGG GGCCTGGGTG CCTATGGCGG TTATAACTTC
AACGACAGCT TTGGTCTCGA AACCAGCGTG TTCGGTACCG ACAGCTTTAT TGATGGTGTC
GACCTGCAGG TCGTGGGCCT GACTTTTGCC CCCACTGTGC GCCATGCATT CAGCGACACT
GTCACTGTTT ATCTCAAAGG CGGTGTGGTG TATCAGGTGA TTGCCAGTGA CGACAGCCTG
GACGATGACT ATCAGGGTAC GGGTTACCTG CTTGGCGCTG GCGTAGATAT CAGTTTCTCC
AGCAATCTGG CCATGCGGGT ATTCTATGAA TTCAGTGAAA TTGAGCCCGA GCACGATGAG
CTGAACAACT ATTTTGCCAA CACGCGCATG GACCATTATG GCGTGGGCCT GCACTGGCGC
TTCTGA
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| Protein sequence | MKLKCLLASA LMLCAVSPVF AAKDLGFYAG GYVSNTNLDD KIGPFDESAW GLGAYGGYNF
NDSFGLETSV FGTDSFIDGV DLQVVGLTFA PTVRHAFSDT VTVYLKGGVV YQVIASDDSL
DDDYQGTGYL LGAGVDISFS SNLAMRVFYE FSEIEPEHDE LNNYFANTRM DHYGVGLHWR
F
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