| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_3421 |
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| Symbol | |
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| ID | 4605668 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 4049872 |
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| End bp | 4050498 |
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| Gene Length | 627 bp |
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| Protein Length | 208 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 639782841 |
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| Product | peptidase E-like protein |
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| Protein accession | YP_929293 |
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| Protein GI | 119776553 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3340] Peptidase E |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGCTGC TGTTACTGAG TGATACCCGC GCTGACGAAA TTCGGGCCTG TCTGGGCAAT
TGGCTGACCT CCATCGGTGA CAATCCCAGC GTGGGCTACC TGGCCTCCAG CGCCGATCCC
ACCCGTGAAT ACTTTCAGCC CATAGTCGAA CTCTACGATA GCCTGGGCGC ACAGATAACC
GCTTTTGCAG AACCTATCCA CGGACCGGAC TGCGAACTCT ACGAGCCGCT GTTTGCCTGC
GACATCATTC ATCTTTGCGG TGGCAACAGC TTTGAATACC TGCACCATCT TGGTGCGAGC
GGTTTGGATG AGCGCCTGAA AGCCTTTGTC GCAGCTGGCG GCCATCTGGT GGGTGTCAGC
GCCGGAGCCA TCCTGATGAC ACCGGACATT GCCTCCGCGG TCTACTGTGG CGACGAGCCC
GTCGTACCCT TTCAAATCAC TCAAGGCCTG GGGCTGGTCC CCTTTGGGGT CATCCCCCAT
GTTCAGGACA AGGCAGCGCT GGCAGCCAGG CTCCAAGACA GTGACGTGAA CGGCGACCTG
TACCTGATGG CAGACACAGA TGCCATTGAG CTGAGGGGCA GTACGCTTCA CACTACAGGC
ACCCCCACTC TTTTGGCAGC GGAATAG
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| Protein sequence | MSLLLLSDTR ADEIRACLGN WLTSIGDNPS VGYLASSADP TREYFQPIVE LYDSLGAQIT
AFAEPIHGPD CELYEPLFAC DIIHLCGGNS FEYLHHLGAS GLDERLKAFV AAGGHLVGVS
AGAILMTPDI ASAVYCGDEP VVPFQITQGL GLVPFGVIPH VQDKAALAAR LQDSDVNGDL
YLMADTDAIE LRGSTLHTTG TPTLLAAE
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