| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_3412 |
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| Symbol | |
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| ID | 4605659 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 4036983 |
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| End bp | 4039058 |
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| Gene Length | 2076 bp |
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| Protein Length | 691 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 639782832 |
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| Product | ferrichrome iron receptor |
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| Protein accession | YP_929284 |
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| Protein GI | 119776544 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4773] Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.00000883951 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCAGCT CCAGCCTCTT CAGATTGACC GGGCTGTCTG TGGCACTGAT GTCAGCCATG
GCTGCCCATG GTCAGGACAC TTCTGACATC AGTATCGAAA GGATGATCGT CACCACTAAA
GCCACTGCAC CTTCCACCAC CAAGGGCGAC TTCAGCTTGC TGAAGGCACC GCAGAACATT
CAGATCTTGT CCAAAAATTT CCTTGATGAT CAGGGTGTCG TGCATTTGGA AGACGCGTTG
AAGAACGTGG CCGGGATACA ACCCGGTGGT TACTATCAGG GTTACGACTA CTTCCGAATC
CGGGGTTTCG ATGCCTCGCA AAACATCTAT CTCGACGGTC TGCGCCTGAA TGACAATGGC
CTGGGTGCCA ATGTGGAGCA GTCGAATCTC GAAACCCTTG AGGTGATGAA AGGGCCTTCC
TCCACTCTTT ACGGTGCAGG TGCCATCTCG GGTATGGTGA ACCTGGTGAC CAAACGGCCA
ACCCAAACCG ACATGGGCAG CGTAAGCTTG CAGGGTGGCA ATCTGGGCTA CCGTGAGCTG
GATGCCGACA TTAACCGCGT ACTGAGCGAC GATGGTGACA TCTTCGGCCG TGTTGGTCTG
GCGTACCGAG AAGCGGCCAA CAGCGTGGAC CATATTGACG GACAACATCG CTTCTTTATC
GCGCCGTCGC TCACCTTTAA TCTGGGTGAA GACGCTGCTC TGACCCTGCT CACCAGCTAC
ACAAAAGACG ATAATCAGTT AGGCATGCCA CTGCCTGCCA TGGGAACTGT GCTGCCGTCA
CCGCTGGGTG AGCTGGATAA GGATCTCTTT TACGGCAACA TCAAAGATCC CGGTGCCATC
AACGACGAAA CCTATCGTCT GGGTTACGAG CTGCGCTGGG ACCTGACCGA CAACTTGCAG
CTGCGTCAGA ATGTCCGATT CCAGGATGCC TCCAGCGATT GGCACAATCT CTACTATCCC
AGCAGTTACG ATGCCGACAC CGGCGATTTG AACCTGTACA AATTCAGCTA TCGCACCCAG
TGGAAAACCT GGGCACTGGA CACCGGACTC AATGGCCGCG TTATGCTGGG TGAAACCGAG
CACCTGTTTA CCGCAGGGGT GGATATCTTT ATGTCGGATC TCTACACCAG CGGCGCCCTG
GGCAGTGATT TCCCCACCAT CAATCTCTAC CAGCCGGATT ACAGTGTCTT CCCTGATACC
GAGGTCAATC AGTTCGGCCC CGAAAGCAAG GTTGAGAATC GTATTCTGGG TCTGTACGCC
CAGGATCAAA TTAATCTGGG AGAGCACTGG AGCTTTACAC TGGGTGCCCG TTTCGATCGC
TACAAGCAAG CCTACGTGGA AGACTACGAA ACCAAACTGA GCCCGAGAGC CGGTGTCAGC
TACGCTTTCA ACGACGATTG GGTGGCCTTT GCCAGCTATT CTGAAGCCTT CACCCCCCAG
TCCTATGTGG ACAGTAATGG CAAGGTTCTC GACCCGGAAG AAGGCCAGCA GTGGGAACTG
GGCCTTAAGA GCCGCGCCTT TAACGGTGAC CTGAATGCCA CTGTGTCCCT CTATGAGCTG
ACCAAAAAGA ACATAGCGCT GGCCAATGTG GATGCCGGTG GCAACTTTAC CTACTCCGCA
TCCGGCGAGC TGCAAAGTCG TGGCATAGAG CTGGATTTGC AGTGGCTGCT GACACAGGAT
CTGCAGCTGA TTGGCCACGG CGCATACACC CATGCCGTCG ATACCGAGCA CGACAAGTGG
GTCGCCAATG TACCCCGTTA TGCCCTGGGT GGCTGGCTAA AATACAACTT GGATGACATG
CTCGATGGTC TGAGCGTGGC GGCCGGTGTC AATCACTACG GCAAGCAGCA AGGCAACGTA
CAGGCGGTAC TGACTGACAG CAGCGAAGGC GACTTTTACC TGCCAGCCTA CACTCTGGTT
GACCTGAACC TGACCTACAG CTGGGACCAG TACGATCTGC GCTTTATCGT CAACAACCTG
ACCGATGAAG ACTACTTCTC TGGCTCCGAC AGTCTGCTGC GGGTACTGCC GGGCAGCGGC
CGTGAAGTGA AACTCAGCTT CACTGCCAAC TGGTAA
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| Protein sequence | MSSSSLFRLT GLSVALMSAM AAHGQDTSDI SIERMIVTTK ATAPSTTKGD FSLLKAPQNI
QILSKNFLDD QGVVHLEDAL KNVAGIQPGG YYQGYDYFRI RGFDASQNIY LDGLRLNDNG
LGANVEQSNL ETLEVMKGPS STLYGAGAIS GMVNLVTKRP TQTDMGSVSL QGGNLGYREL
DADINRVLSD DGDIFGRVGL AYREAANSVD HIDGQHRFFI APSLTFNLGE DAALTLLTSY
TKDDNQLGMP LPAMGTVLPS PLGELDKDLF YGNIKDPGAI NDETYRLGYE LRWDLTDNLQ
LRQNVRFQDA SSDWHNLYYP SSYDADTGDL NLYKFSYRTQ WKTWALDTGL NGRVMLGETE
HLFTAGVDIF MSDLYTSGAL GSDFPTINLY QPDYSVFPDT EVNQFGPESK VENRILGLYA
QDQINLGEHW SFTLGARFDR YKQAYVEDYE TKLSPRAGVS YAFNDDWVAF ASYSEAFTPQ
SYVDSNGKVL DPEEGQQWEL GLKSRAFNGD LNATVSLYEL TKKNIALANV DAGGNFTYSA
SGELQSRGIE LDLQWLLTQD LQLIGHGAYT HAVDTEHDKW VANVPRYALG GWLKYNLDDM
LDGLSVAAGV NHYGKQQGNV QAVLTDSSEG DFYLPAYTLV DLNLTYSWDQ YDLRFIVNNL
TDEDYFSGSD SLLRVLPGSG REVKLSFTAN W
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