Gene Sama_3386 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_3386 
Symbol 
ID4605633 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp4013742 
End bp4014173 
Gene Length432 bp 
Protein Length143 aa 
Translation table11 
GC content53% 
IMG OID639782806 
Product4-hydroxybenzoyl-CoA thioesterase 
Protein accessionYP_929258 
Protein GI119776518 
COG category[R] General function prediction only 
COG ID[COG0824] Predicted thioesterase 
TIGRFAM ID[TIGR00051] acyl-CoA thioester hydrolase, YbgC/YbaW family 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATCTC TGCTTCACGC CGAGACAGAA ATCATCATTC CCTTCCACGA TGTGGATCCG 
ATGCAGATCA CCTGGCACGG TAACTACCTG CGTTACTTCG AGATTGTTCG CTGTGAGCTT
TTGGACAAAC TCGACTACAA CTACCGCCAG ATGCAGGAGT CCGGCTTTGC CTGGCCGATA
GTGGATGTGC AGATCAAGTA TGTTCGCAGC AGCACCTTCG GTCAGAAAAT TCGAGTCAGT
GCCGATCTGG TGGAGTGGGA AAATCGCCTG AAAATCAATT ATCAGGTTCG GGATGCCGAA
AGTGGCGAGC GACTCACCAA GGGGTACACC ATTCAGGCCG CCGTGGACAT GAGTAATAAC
GAACTCTGCT TTGTCACGCC CGAGGTATTT CAGGCCAAAA TTCGCCCGCT GCTGGGCGAA
GCGGACGCCT GA
 
Protein sequence
MKSLLHAETE IIIPFHDVDP MQITWHGNYL RYFEIVRCEL LDKLDYNYRQ MQESGFAWPI 
VDVQIKYVRS STFGQKIRVS ADLVEWENRL KINYQVRDAE SGERLTKGYT IQAAVDMSNN
ELCFVTPEVF QAKIRPLLGE ADA