| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_3385 |
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| Symbol | |
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| ID | 4605632 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 4012189 |
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| End bp | 4013745 |
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| Gene Length | 1557 bp |
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| Protein Length | 518 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 639782805 |
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| Product | histidine ammonia-lyase |
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| Protein accession | YP_929257 |
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| Protein GI | 119776517 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2986] Histidine ammonia-lyase |
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| TIGRFAM ID | [TIGR01225] histidine ammonia-lyase
[TIGR01226] phenylalanine ammonia-lyase |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTAACC AATCAACTGA AATGAAAGAG ACTGTTAAGT TTGGCTACGG CGCACTGACC
ATAGAGCAGG TAGTCGCCAT CGCCAAAGGC GCCAGGGTTG AACTCAGACG CGACCAGGAA
TACGTGGAAT ACATCCAGCG CGGCGCCCGC TTTATCGACA GTCTGCTGGC CGAAGAAGGC
GTAGTGTACG GCGTAACCAC AGGTTACGGC GACTCCTGCA CTGTGACAGT AGGGCTGGAT
CTGGTGCACG AACTGCCGCT GCACCTGTCG CGCTTCCACG GCTGTGGCAT GGGCCGCGAG
CTTACGCCAA TGCAGTCCCG CGCCGTCATG GCCTGCCGCT TGAACTCTCT GGCCATCGGC
AAGTCCGGGG TCAGCTTCGA ATTGCTCGAG CGCATCGAAA CCCTGATTAA TGAAGACATC
TGCCCGGTTA TCCCGGAAGA AGGCTCGGTG GGCGCCAGCG GCGATTTGAC TCCGCTGTCT
TATCTGGCCG GCGTGCTGAT AGGCGAGCGT GACGTGTTTT ATCGCGGCGG CCGCCTGCCC
AGCAGTGAAG TGTTCCAGAA GCTGAATATC ACCCCGCTGA AGCTGCGCCC GAAAGAGGGT
CTGGCACTGA TGAACGGCAC AGCGGTGATG ACGGCACTGG CTTGTCTTGC ATATGACAGA
GCAGACTACC TGACCCGTCT GTCCTCACGC ATCACCGCCA TGGCATCCTT GACCCTCAAA
GGCAACTCCA ACCATTTCGA CGACATCCTG TTTGCCGCCA AGCCCCACCC GGGTCAGAGT
CGGGTAGCCA GCTGGATCCG TGATGACCTC AATCACCACG AGCATCCCCG CAACTCTGAC
CGCTTGCAGG ATAGATATTC CATCCGCTGC GCGCCCCATA TCATAGGCGT GCTGGCCGAT
GCCCAGCCAA TGTTGCGCCA GTTTATTGAG AACGAACTTA ACAGCGCCAA CGACAACCCG
ATTGTGGATG GCGAGGGCGA GCACATCCTC CACGGTGGCC ACTTCTACGG CGGCCATATC
GCCTTTGCCA TGGACAGCCT CAAGAATCTG GTGGCCAACA TCAGCGACCT GATTGACCGC
CAGATGGCGC TGGTGATGGA TCCCAAGTTT AACAATGGCT TGCCAGCGAA TCTCTCCGGC
GCCGAAGGTG CCCGTCGCCC CATCAATCAC GGCTTCAAGG CGGTGCAGAT TGGCGTATCG
GCTTGGACCG CCGAAGCGCT CAAACTCACT ATGCCTGCCA GCGTGTTTTC CCGTTCTACC
GAGTGCCACA ACCAGGACAA GGTCAGCATG GGCACCATTG CCGCCCGTGA CTGTTTGCGG
GTGCTGGAGC TGACTGAGCA GGTGGCTGCC GCTGCGCTGC TGGCGATGAC CCAGGGTATG
CGCCTGCGCA TCCGTCAGGG CGAGCTGTGT GAGTCGTCAC TAACCGCTTC GGTTGCCAAA
ACCCTGGCCC AGGTCAGCGA GGCTTGCCCG CTGGTGACAG AAGACAGGCC ACTCGAAGCC
ACGCTGCGCC AGACGCTGGC ACGCATTCAG GCCGGTGAGT GGGAGGTGTG TCGATGA
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| Protein sequence | MTNQSTEMKE TVKFGYGALT IEQVVAIAKG ARVELRRDQE YVEYIQRGAR FIDSLLAEEG
VVYGVTTGYG DSCTVTVGLD LVHELPLHLS RFHGCGMGRE LTPMQSRAVM ACRLNSLAIG
KSGVSFELLE RIETLINEDI CPVIPEEGSV GASGDLTPLS YLAGVLIGER DVFYRGGRLP
SSEVFQKLNI TPLKLRPKEG LALMNGTAVM TALACLAYDR ADYLTRLSSR ITAMASLTLK
GNSNHFDDIL FAAKPHPGQS RVASWIRDDL NHHEHPRNSD RLQDRYSIRC APHIIGVLAD
AQPMLRQFIE NELNSANDNP IVDGEGEHIL HGGHFYGGHI AFAMDSLKNL VANISDLIDR
QMALVMDPKF NNGLPANLSG AEGARRPINH GFKAVQIGVS AWTAEALKLT MPASVFSRST
ECHNQDKVSM GTIAARDCLR VLELTEQVAA AALLAMTQGM RLRIRQGELC ESSLTASVAK
TLAQVSEACP LVTEDRPLEA TLRQTLARIQ AGEWEVCR
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