Gene Sama_3302 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_3302 
Symbol 
ID4605549 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp3928981 
End bp3929283 
Gene Length303 bp 
Protein Length100 aa 
Translation table11 
GC content61% 
IMG OID639782722 
Producthypothetical protein 
Protein accessionYP_929174 
Protein GI119776434 
COG category[S] Function unknown 
COG ID[COG3212] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.194945 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACACC GGTTTTTGCT GACACTCTTG TTTGGCGCCT GTCTGCACCT GGCAACGCCC 
ATACCTGTCC TGGCCAAGGC CTATGCCCAG ATGAACAATC AGGGACAGCA GCAGTCGCTC
AAAGTCACCA GTGGCGATCA GGCCGCCGGT ATGGCCGCCA GCCGCTATCC CGGGCGGGTG
CTCAAGGTCA GCCGCAGCCA GGTGGGTGGC AACCCCGGCT ACCGGGTCAA GATGGTCAGC
GACGACGGTA AAGTCTTTTA CGTATCTGTG GATGCCCGTA CCGGACGGGT TGGGAGAGAC
TGA
 
Protein sequence
MTHRFLLTLL FGACLHLATP IPVLAKAYAQ MNNQGQQQSL KVTSGDQAAG MAASRYPGRV 
LKVSRSQVGG NPGYRVKMVS DDGKVFYVSV DARTGRVGRD