| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_3285 |
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| Symbol | |
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| ID | 4605532 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 3903099 |
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| End bp | 3903902 |
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| Gene Length | 804 bp |
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| Protein Length | 267 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 639782705 |
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| Product | putative amino acid ABC transporter |
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| Protein accession | YP_929157 |
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| Protein GI | 119776417 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTAAGC TATTATATAC GCTCGTGTTT TGCAGCTTTG CGACCCTGTT CTCGACCACT
GCCAATGCCC AGAACGAGTC CCCCTTGGTG TTTTGTGTCG AATCCACCGA GTTTCCGCCC
TTCAACTACT TTGTCCGGGA CGGAAAACAA AAGACAGAGA CCCTTGCCGG TTACGACATC
GAGGTGCTCA AACACGTATT TGAAGATATT CCCTATGAAG TGATAGCCCT ACCCTGGCGG
CGCTGCCTGA TGTCACTGAC TACAGGGGCC GTGGACGCCG TCATGAGTGC CTCAATGAAT
GATCAACGCC GCAGGGATTA TATCTCATCC GCTCCCTATT ATTATCTGAC ACCGGGGTAT
TTTTTTCTGA AACAAAACAC TGATGCTCCC CGGGAAGTTG CGGCCGCCGA AGAACTCTGG
CAATACGGTG CCCTCTGTGG TCTTGGAGGC CATAACTACG CCAACTTTGG ACTGGCGGCC
GACAAGGATG TGATGCGAAT GGCCAGCTAC GAACAGCTGG CGGAGACCCT GAAAATGGGC
CGCTGCCGTT TTTATTTGGA CCGGCTGGAA CTGGTCGCGC CCAAGATGGC CTTGATGGAC
ACCCCGCCCT TGCCAGCCTT GGAGAAAGGC CTGATTAACG GCGCCGCCGC TGAGCCTTTC
TATGTGCTGA TTTCCCGCAA AAGTCCAAAC AGCGAAAATC TGAAACTTCT TTTTGATGAG
CGTATTGCGC TGCTCAGAGC ATCCGGAAAG CTCGCACAAA TCCTGGAACA GGCAAACAAG
CAATTGGAAC CGGCCACCCG CTAG
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| Protein sequence | MFKLLYTLVF CSFATLFSTT ANAQNESPLV FCVESTEFPP FNYFVRDGKQ KTETLAGYDI
EVLKHVFEDI PYEVIALPWR RCLMSLTTGA VDAVMSASMN DQRRRDYISS APYYYLTPGY
FFLKQNTDAP REVAAAEELW QYGALCGLGG HNYANFGLAA DKDVMRMASY EQLAETLKMG
RCRFYLDRLE LVAPKMALMD TPPLPALEKG LINGAAAEPF YVLISRKSPN SENLKLLFDE
RIALLRASGK LAQILEQANK QLEPATR
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