| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_3240 |
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| Symbol | |
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| ID | 4605487 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 3833455 |
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| End bp | 3834792 |
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| Gene Length | 1338 bp |
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| Protein Length | 445 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 639782656 |
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| Product | putative regulatory protein UhpC |
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| Protein accession | YP_929112 |
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| Protein GI | 119776372 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2271] Sugar phosphate permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.591266 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGGACT TTTTCAAAAC GCGGCCGGAT CAGCCCCTGA TTGAAGGGAC ACCGGAAAAA
ATCCGCTCTA TTTATAAAAA ATATCAATGG CAGGTGTTCT TGGGACTGGT GCTGGGTTAT
GCCATGTTCT ACGTCGCCCG CATGAGTTTG AACGTCGCAA AAAAACCTAT GCTGGACGCC
GGCATTGTGA CCCTGGATGA ACTGGGGATC ATAGGCTCGG CATTTTTCTT AACCTATGCC
GTGGGTAAGT TCTCCAACGG TTTCCTGTCG GACTACGCCA ACATCGGTCG CTTTATGTCG
GTGTCGTTGG GTCTGTCGGC CATCACCTGT TTGTTTATGG GTATGAACAC CGCCACCTTC
TTCTTCATCC TCTTATGGGC GATGAATGGT TGGTTCCAGT CGGTGGGCAG TGCGCCTTCG
TGCGTGTCGA TTTTCCAGTG GTTCTCGCCT AAACAGCGGG GCTCTGTGTA CTCCATCTGG
GGCGGCTCTC GCAACATTGG TGAGGGTATC ACCTGGATTC TGACTGCCAC CGTAGTGAGC
TTCTTCGGTT GGAGAGCGGG CTTTGTGGGT GCCGGTATCG CTACCTTTGC TGCGGCCATC
GCCATGTACT TCGTGCTCAA AGACAGACCA CAAACCTATG GTCTGCCAGA GCCAGCCGTT
GCCTATGGTG AAGACGCTGA AATCAAGAAG AAGGTTGACC CCAAGGAAAT CCGCCGCGCT
CAGCTGTTTA TCCTCAAGCA GCCTACCGTG TGGATCATCG CCCTTGCCTG TGCGGCCATG
TATATCTCCC GCTATGCCAT GAGCTCCTGG GCCGTGCTGT ATCTGCAGGA AGAAAAGGGC
TACAGCCTGA TTGATGCGGG CTTTGCCATG TCGGCTTACC CCATCGCCGG CTTCGCCGGG
GCCATTCTGG CCGGGATTAT CTCTGACAAG GTGTTTAACG CCAACCGTCA CATTCCAACC
CTGCTGTACG GTCTGGCCAA CATTGCTGGT CTGTGCCTGA TGTTCTGGGG CCCTCAAAGT
CGGGTGATGG ATGCCGTTGC CCTGGGTCTG ATTGGTTATG CCATCGGTGG TCTGGTGGTG
TTCCTGGCCG GTCTTACCGC CTGTGACCTG ATGCCCAAGA CTGCCGTGGG CGCGGTGAAA
GGCTTTATCG GCCTGTGCTC CTATATCGCC GCCTCTGCCC AGGAAATCGT GTCTGCCTCG
CTTATCAAAA TTCACGAAGT AGACGGCGTG AAACACTACG ACTTCTCCAC CGCCCAGTAC
TTCTGGCTGG CCGCTGCCGT GGTGTCCATG TTCCTCGCCA TGAGTGTGTG GAATGCCAAG
AAGGTAGTGG ATTACTGA
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| Protein sequence | MLDFFKTRPD QPLIEGTPEK IRSIYKKYQW QVFLGLVLGY AMFYVARMSL NVAKKPMLDA
GIVTLDELGI IGSAFFLTYA VGKFSNGFLS DYANIGRFMS VSLGLSAITC LFMGMNTATF
FFILLWAMNG WFQSVGSAPS CVSIFQWFSP KQRGSVYSIW GGSRNIGEGI TWILTATVVS
FFGWRAGFVG AGIATFAAAI AMYFVLKDRP QTYGLPEPAV AYGEDAEIKK KVDPKEIRRA
QLFILKQPTV WIIALACAAM YISRYAMSSW AVLYLQEEKG YSLIDAGFAM SAYPIAGFAG
AILAGIISDK VFNANRHIPT LLYGLANIAG LCLMFWGPQS RVMDAVALGL IGYAIGGLVV
FLAGLTACDL MPKTAVGAVK GFIGLCSYIA ASAQEIVSAS LIKIHEVDGV KHYDFSTAQY
FWLAAAVVSM FLAMSVWNAK KVVDY
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