Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_3223 |
Symbol | |
ID | 4605470 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | + |
Start bp | 3816118 |
End bp | 3817527 |
Gene Length | 1410 bp |
Protein Length | 469 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 639782639 |
Product | hypothetical protein |
Protein accession | YP_929095 |
Protein GI | 119776355 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAGGA TCACTGGCAT CATCTTACCG CTAATGGCAA CCACATTCAT CTTCGGCTGT TCAGACGATG ATGACAACCG CACAACCGAA CCAGAAACAC CCGTGGCCAT GGCCGCTGTG CGGGTTATCC ACGGCAGTGC CGATGCCCCT ATGGTCAATA TCAAGGCCAA TGGGGCACTG TTTGCCGGGC TCGAAAAGGT CGACTATCTG CAGGGCAGTG GCTTTATCGA CGTCACAGAA GGCAGCTACG ATCTGGCCGT GGATGCCGTC TTGCCCGATG GCACCAGCGC CGAAGTCTTG TCACTCAATG ATGCAGCTCT CGCTGGCGAT ACCCAGTACA CGGTGCTGGC CCACGGGACA GTGGCGGAGG ACAACAACAG CGATAACGAT CTGGGACTGC TGGTGATTGC CAATCCCAAG CAGGCCATCA GCACTGGCAA TATCCGCTTG CAGGTGGTCC ATGCCGCCCC CAACGCCCCC ACAGTGGATG TACATCTCAC TGCCCCCGGA GCTGATCTTG GTGCCAGCGC CGCGACTTTG GGCTATGGCG AATACACCCA ACCCATCGAA GTCGCCGCAG GCAGCTATCA GGTGAGACTG GTGCTGCCAC AGGGCAGCGA AGGCGCGGGT ACAGTAGCCT ACGACCTTGA CCTGCCACAG CTTGATGCCG GTCAGGACTG GTTTATTGCC GCCCTGCCCA ATACAGGAGT TGCCACCTCT CCTGTGGTGT TGCTCGCCAA CAACGGTACA GATACCCTGG TGTTCAATGA CAAACGCACT GAGGCCAGCA TCCGGGTTGC CCACAGTGCC GCCGATGTAC CCCAGGTAGA CATTCTGGCC AATGGCACTA AGGTGGATGC CCTCAGTGGC GCTGCATTTG GACAGGCCAG TGGCTATTTG AACCTTGCAC CAGGCGAATA TCAGGTCGAT ACCGTATTGA CCAGCGACAA CAGCGTGGTG GGCATCAGCG GCGATTTAAC CCTGACTGCA AACCAGATGC TCACTGTGGC CGCCGTTGGC ACACTGGCCA CCGAGTCGCC CGATGTGCCC CTGGAGTACC TGCCTTTGGA TGACAGCCGT CGCCGGGTAG CCACCGAAGC GCAGCTGCGC CTCACCCACG CCCATCCTGC AGTGGGCAAT GTGGATATTT ATGTCACCGC CGATGGCGTG ATAGACAACG CCACCCCAGC CTTCACCGAT GTGGCCTACA AGGCGACTAC CGGTTGGGTC AGTGTGGCCC CCGGGGACTA TGTCGTCAGC GTTACGGCCA CCGGCACCAA GACGGTGGCG ATTGAAACCC CAACCCTGAG TCTGGCCGCC CTTGGCAAAT ACTCGGCCCT GGCCGTGGAT AACCCCGGCG CCACGCCAGC CAACCTGCTG CTGATGGACG ACTTCGTCAG CGCCAACTAA
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Protein sequence | MKRITGIILP LMATTFIFGC SDDDDNRTTE PETPVAMAAV RVIHGSADAP MVNIKANGAL FAGLEKVDYL QGSGFIDVTE GSYDLAVDAV LPDGTSAEVL SLNDAALAGD TQYTVLAHGT VAEDNNSDND LGLLVIANPK QAISTGNIRL QVVHAAPNAP TVDVHLTAPG ADLGASAATL GYGEYTQPIE VAAGSYQVRL VLPQGSEGAG TVAYDLDLPQ LDAGQDWFIA ALPNTGVATS PVVLLANNGT DTLVFNDKRT EASIRVAHSA ADVPQVDILA NGTKVDALSG AAFGQASGYL NLAPGEYQVD TVLTSDNSVV GISGDLTLTA NQMLTVAAVG TLATESPDVP LEYLPLDDSR RRVATEAQLR LTHAHPAVGN VDIYVTADGV IDNATPAFTD VAYKATTGWV SVAPGDYVVS VTATGTKTVA IETPTLSLAA LGKYSALAVD NPGATPANLL LMDDFVSAN
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