Gene Sama_3212 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_3212 
Symbol 
ID4605459 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp3802168 
End bp3802704 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content53% 
IMG OID639782628 
Producthypothetical protein 
Protein accessionYP_929084 
Protein GI119776344 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACAATA ACATCAAAGC TTTATTGGCC ACCACGGCCC TATTTTTTAC TGCGCCCCTG 
CTGGCGGACT CAGGCTGTGG TTTCGAGAGT AAATCCGGTG GCGTGTTTGC CACCTGTAGC
GAGGAGAAGC AGGAAGTGAT CCTGACCGGC ATCGTTGAGG CCCAGCGCCT CGTCACTGAA
TTACCCGAGT TTACCGAGGG TTATAAAACC TACGAGGTGG ATACCCCCGC ACTTGGCCCT
ATAAAGGCTG AAACCGAAGC CACCGAAATA GTGGTGATCA TCGGCACCTG GTGCCCCGAT
TGCCACCGCG AAACCCCGCG CTTTATCCGT ATTATGGAAG AGGTGGGCAA CCCCAATATC
AAAGTCACTT ACATTGGTGT AGACCGCGCC AAGGCCGACC CTGAGGGCCT GGCCGCCAAG
TATGAGTTCA AACGTATTCC CACCTTTATC GTGCTGCAAA AAGGTGAGGA AATCGGCCGT
ATCGTCGAGC GCCCAACCGA ATCGCTGGAA AAAGATTTGG CGAACATTCT GAAGTAA
 
Protein sequence
MHNNIKALLA TTALFFTAPL LADSGCGFES KSGGVFATCS EEKQEVILTG IVEAQRLVTE 
LPEFTEGYKT YEVDTPALGP IKAETEATEI VVIIGTWCPD CHRETPRFIR IMEEVGNPNI
KVTYIGVDRA KADPEGLAAK YEFKRIPTFI VLQKGEEIGR IVERPTESLE KDLANILK