Gene Sama_3167 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_3167 
Symbol 
ID4605414 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp3755074 
End bp3755628 
Gene Length555 bp 
Protein Length184 aa 
Translation table11 
GC content50% 
IMG OID639782583 
Producthypothetical protein 
Protein accessionYP_929039 
Protein GI119776299 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGAAAA AATTCCTTAT CGTGATTTTA TTGCTGTTAG CCGCCCCCTT TATGGTGGCC 
CTGTTTATTA AGTCGGATTA TGAGGTCAGT GTCAGTCGCA CCATCGACCG TCCGCTTGAT
GAAGTCTTTG GCTACCTCAG ATTGCTGAAG CATCAGGATG AATTCAGTGT CTGGGCCAAG
ATGGATCCCA ACATGCAGCA GCATTTTACC GGCATAGATG GAGAGCCCGG TTTTGTCAGT
GCCTGGGAGA GCAGCAATCC CGATGTGGGT AAAGGCGAGC AGGAAATTAT CGCCATAGTG
CCCGGTAAGC GAATTGATTA CGCGCTTCGT TTTATCGAAC CCTTTACGTC CAACGACAGC
GCTTATCTCA TCACTGAGCC CATTGAAGAC GGCAGCACCC TGGTGACCTG GGGTTTTGTG
GGCCATATGT CGTATCCCAT GAACCTGCTT ATTCCCCTGA TGGATGTTGA GTCCTTAATC
CTGAAAGACC TGGATACCGG TCTTGCCAAT TTGAAACAAA TACTGGAGCG GCAGGCGACG
CCCCAGCCTG AATGA
 
Protein sequence
MLKKFLIVIL LLLAAPFMVA LFIKSDYEVS VSRTIDRPLD EVFGYLRLLK HQDEFSVWAK 
MDPNMQQHFT GIDGEPGFVS AWESSNPDVG KGEQEIIAIV PGKRIDYALR FIEPFTSNDS
AYLITEPIED GSTLVTWGFV GHMSYPMNLL IPLMDVESLI LKDLDTGLAN LKQILERQAT
PQPE