| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_3141 |
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| Symbol | |
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| ID | 4605388 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 3728575 |
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| End bp | 3729483 |
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| Gene Length | 909 bp |
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| Protein Length | 302 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 639782557 |
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| Product | adhesion protein, putative |
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| Protein accession | YP_929013 |
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| Protein GI | 119776273 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0803] ABC-type metal ion transport system, periplasmic component/surface adhesin |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.452459 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTGCGCA TCAATTCTAA GTTGCTCGGG GGCCTGCTGG CCCTCACTCT GGGCCACAGC
GCCAGTGCCG TGGCCGGTTT GAATATCTTT GCCTGTGAGC CCGAATACGC GGCACTGGCC
AAGGAGCTGG CGCCGGACGC CAGCATTTAC TCGGCGACCA CGGCCATGCA GGACCCTCAT
CAGGTGCAGG CAAGACCCAG CTTGATAGCC AAGATGCGTC AGGCCGATCT GGCCCTGTGC
GCAGGCGCTG ACCTTGAAAT TGGCTGGCTG CCGATGCTGC AGATGAAATC CGCCAATGCC
AACGTGAGAG ACGGCAGCGA CGGCATGCTC TACGCCGCCG AAGTCATTGA GACTCTGGAT
AAGCTGGATA AGGTCGACCG CTCCATGGGC GATGTACATG CCAAGGGCAA CCCGCATCTG
CACTTTTCGC CACGCCGCTT TTTGCAGGTG GCCGAAGCAG TTACCGAGAG GCTTAAACGC
CTGGATGCGG ACAATAGCGC AGCTTATGAT GCCGCCTTTG TCCGCTTCAG CGAGCGCTGG
CAAACCGCCA TTCCGGGCTG GGAAACATCA GCGCAGGAGC TCGCCGGCCG CAAGGTGATT
GCCTATCACA CCAGCTTTCG TTATCTCTTC GATTGGCTTG GCATAGAGCA GGTTGCCGAT
TTGGAGCCCA AACCGGGTCT GCCGCCTTCC AGTGGACACC TCGCCGGCCT GTTGGAGCGT
GCCCGCAAGG GGGATGTTTC GGCGATTGTG GTGGCCTCCT ATCAAGACAC CCGCGGTGCC
AACTGGCTGG CCGAAAAAGC CGGACTGCCG GTGCTGGTGC TGCCCATGTC TGTGGGAGGC
AATGATGAAA GCCAGGATCT GTTCAGTCTC TACGACAGCG TGATTAACCT TTTGAAAGGG
GCGAACTGA
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| Protein sequence | MVRINSKLLG GLLALTLGHS ASAVAGLNIF ACEPEYAALA KELAPDASIY SATTAMQDPH
QVQARPSLIA KMRQADLALC AGADLEIGWL PMLQMKSANA NVRDGSDGML YAAEVIETLD
KLDKVDRSMG DVHAKGNPHL HFSPRRFLQV AEAVTERLKR LDADNSAAYD AAFVRFSERW
QTAIPGWETS AQELAGRKVI AYHTSFRYLF DWLGIEQVAD LEPKPGLPPS SGHLAGLLER
ARKGDVSAIV VASYQDTRGA NWLAEKAGLP VLVLPMSVGG NDESQDLFSL YDSVINLLKG
AN
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