| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_3137 |
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| Symbol | |
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| ID | 4605384 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 3725413 |
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| End bp | 3726372 |
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| Gene Length | 960 bp |
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| Protein Length | 319 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 639782553 |
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| Product | response regulator receiver protein |
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| Protein accession | YP_929009 |
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| Protein GI | 119776269 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCCAATG ACGCAGACCT GATGAACGAA CTCCACTGGC TTATCGATAT GGTGCAAACC
ATAGAGGTGG GTCTGGTGGT GCTGGACAGA AACTTCAATA TCGCCCTGTG GAATGGCTTT
ATGGAAAACC ACAGTGGCGT TTCCCCCAAC GCCATCAAGG GCAAAAACCT GTTCGAAGAG
TTTCCCGAGC TCCCGGCCGC CTGGCTGAAA AAGAAAATGG AGTCCGTGTA CCTGCTGAAG
AACCGCGCCT TTATCAGCTG GGAGCAGCGC CCTTTTGTAT TTCAGTTTAA AAACTACCGC
CCCATTACCG GCCGCGCGGA GTTTATGTAC CAGAACGTCA CCCTGCTGCC ACTGGCATCG
CTCACCGGGC AAATTACCCA TATCAGCATC ATTGTGTATG ACGTTACCGA CGTGGCGGTG
AATAAACTGC AGCTGAAAAA TGCCAATGAA CGCCTGGAGC ACCTGAGCCA AACCGACGGC
CTTACGCAAC TGCACAATCG TCGCCACTGG CAGGAGTGCA TGAACCGGGA GTACGAGCGT
TTTAACCGCT ATGGCGATCC TGTCAGTCTG GTGATGTTTG ATATTGACCG CTTCAAGCAG
GTGAACGATG AACACGGCCA TGTAGCCGGT GACAAGGTTA TCCAGCACAT AGCCCACCTG
CTGAGCCAGT CGCTGCGGGA AACCGACTGC GCCGGTCGCT ACGGCGGCGA AGAGTTTGCT
GTGGTCCTCA CCGGCACCAC CGCCGAAGAG GCGTATCACT TTACCGAGCG CCTGCGGGAG
AAAGTGGCCT CCTCTGCCAT CCAGTTTGGC GGCAAGAGCA TTCAGGTCAC CATCAGCCTG
GGCATTTGCG GTATGGACGA CTTTGTCGAC AACGAATCCC AGTGGCTTGC GTGCGCCGAT
CAGGCTCTGT ATCAGGCTAA ACAGCAGGGA CGCAACCGCA CAGTGATCTA CAGCGAATAA
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| Protein sequence | MSNDADLMNE LHWLIDMVQT IEVGLVVLDR NFNIALWNGF MENHSGVSPN AIKGKNLFEE
FPELPAAWLK KKMESVYLLK NRAFISWEQR PFVFQFKNYR PITGRAEFMY QNVTLLPLAS
LTGQITHISI IVYDVTDVAV NKLQLKNANE RLEHLSQTDG LTQLHNRRHW QECMNREYER
FNRYGDPVSL VMFDIDRFKQ VNDEHGHVAG DKVIQHIAHL LSQSLRETDC AGRYGGEEFA
VVLTGTTAEE AYHFTERLRE KVASSAIQFG GKSIQVTISL GICGMDDFVD NESQWLACAD
QALYQAKQQG RNRTVIYSE
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